RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 FBXW9Q5XUX1 488 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 SAXO2Q658L1 398 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 OR7E24Q6IFN5 339 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 OGFOD2Q6N063 350 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 SLC48A1Q6P1K1 146 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 APOOLQ6UXV4 268 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 C17orf107Q6ZR85 190 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 FRA10AC1Q70Z53 315 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 SPATA19Q7Z5L4 167 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 NUDT13Q86X67 352 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 LILRA2Q8N149 483 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF675Q8TD23 568 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF681Q96N22 645 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 MTERF1Q99551 399 aaKnown RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 DOK1Q99704 481 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 ANKRA2Q9H9E1 313 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 NUDT4Q9NZJ9 180 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 KLHL9Q9P2J3 617 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 PCTPQ9UKL6 214 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 DNAJC15Q9Y5T4 150 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 CIB4A0PJX0 185 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 SUPT3HB4E1H0 165 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 FBP2O00757 339 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 NDUFB5O43674 189 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 EFNA2O43921 213 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 SUPT3HO75486 399 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 BCAS2O75934 225 aaPredicted RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 ERCC1P07992 297 aaPredicted RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 RPSAP08865 295 aaKnown RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 GFAPP14136 432 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 ME2P23368 584 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 OMGP23515 440 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 FEN1P39748 380 aaKnown RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 CDH13P55290 713 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 MYBPC1Q00872 1141 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 CLCQ05315 142 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 DDX39BQ13838 428 aaKnown RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 BLMHQ13867 455 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 SLC9A3R2Q15599 337 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 CLEC6AQ6EIG7 209 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 SULT1C3Q6IMI6 304 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 GRHL2Q6ISB3 625 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 C11orf87Q6NUJ2 197 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 BRICD5Q6PL45 260 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 DHDDSQ86SQ9 333 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 SLC44A2Q8IWA5 706 aaPredicted RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 CNRIP1Q96F85 164 aaPredicted RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 C3orf30Q96M34 536 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 WWC2-AS2Q96NR7 200 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 NSUN5Q96P11 429 aaKnown RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF300Q96RE9 604 aaPredicted RBP10.07□□□□□ -0.8
TRIM56-204ENST00000487252 CDRT15Q96T59 188 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 COQ10BQ9H8M1 238 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 AKTIPQ9H8T0 292 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 MID1IP1Q9NPA3 183 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 TMEM45AQ9NWC5 275 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 TAS2R16Q9NYV7 291 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 MALT1Q9UDY8 824 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 LRCH1Q9Y2L9 728 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 NOTCH3Q9UM47 2321 aa10.07□□□□□ -0.8
TRIM56-204ENST00000487252 DNAH9Q9NYC9 4486 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PLXNB1O43157 2135 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 A0A1W2PRB8 838 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 TMEM129A0AVI4 362 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 BBIP1A8MTZ0 92 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PDLIM1O00151 329 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 FOXE1O00358 373 aaPredicted RBP10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PPP6CO00743 305 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 ACOT8O14734 319 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PLPP2O43688 288 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 ANGPTL1O95841 491 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 ITGA5P08648 1049 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 ALDOCP09972 364 aaKnown RBP10.06□□□□□ -0.8
TRIM56-204ENST00000487252 GPR6P46095 362 aaPredicted RBP10.06□□□□□ -0.8
TRIM56-204ENST00000487252 FOXG1P55316 489 aaPredicted RBP10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PKNOX1P55347 436 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 SESN3P58005 492 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PSME3P61289 254 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 IL1RL1Q01638 556 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 POU3F1Q03052 451 aaPredicted RBP10.06□□□□□ -0.8
TRIM56-204ENST00000487252 BAMBIQ13145 260 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 CYP27C1Q4G0S4 372 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 AGKQ53H12 422 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 XKR7Q5GH72 579 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 ELFN2Q5R3F8 820 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 RUSC1-AS1Q66K80 236 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 C17orf78Q8N4C9 275 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 KIR3DL3Q8N743 410 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PDPRQ8NCN5 879 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 TSPEARQ8WU66 669 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 TWIST2Q8WVJ9 160 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 EXT2Q93063 718 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 MRPL1Q9BYD6 325 aaKnown RBP10.06□□□□□ -0.8
TRIM56-204ENST00000487252 TUBB1Q9H4B7 451 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 NARFLQ9H6Q4 476 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms