RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 OR2T1O43869 369 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 PLGP00747 810 aaPredicted RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 H1F0P07305 194 aaKnown RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 RAP2AP10114 183 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 PTNP21246 168 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 ENPP1P22413 925 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 RBM34P42696 430 aaKnown RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 RPS5P46782 204 aaKnown RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 SMIM11AP58511 58 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 RAC3P60763 192 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 VLDLRP98155 873 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 SPIBQ01892 262 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 OR7A5Q15622 319 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 CTU2Q2VPK5 515 aaKnown RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 FGD3Q5JSP0 725 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 GTF2IRD2BQ6EKJ0 949 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 OR2A2Q6IF42 318 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 TMPPEQ6ZT21 453 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 GTF2IRD2Q86UP8 949 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 RNF166Q96A37 237 aaPredicted RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 SLC25A36Q96CQ1 311 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 ADGRG7Q96K78 797 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 ARL5BQ96KC2 179 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 HS6ST2Q96MM7 605 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 PIP5K1AQ99755 562 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 TTYH2Q9BSA4 534 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 NAA11Q9BSU3 229 aaPredicted RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 KLHL4Q9C0H6 718 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 COQ10BQ9H8M1 238 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 IL1RAPQ9NPH3 570 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 A4GNTQ9UNA3 340 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 TRAPPC4Q9Y296 219 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 ZNF175Q9Y473 711 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 FAM215AQ9Y5M1 114 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 MED12LQ86YW9 2145 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 ERICH4A6NGS2 130 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 EIF1BO60739 113 aaKnown RBP10.21□□□□□ -0.77
NUP50-216ENST00000486184 DIRAS1O95057 198 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 AGFG2O95081 481 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 SEMG1P04279 462 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 ERFP50548 548 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 SMSP52788 366 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 NUP107P57740 925 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 PMPCAQ10713 525 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 MFSD13AQ14CX5 517 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 ZNF239Q16600 458 aaKnown RBP10.21□□□□□ -0.77
NUP50-216ENST00000486184 FAM69AQ5T7M9 428 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 RTL6Q6ICC9 239 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 ZNF730Q6ZMV8 503 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 FCRLAQ7L513 359 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 P3H2Q8IVL5 708 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 PIK3C3Q8NEB9 887 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 FNDC9Q8TBE3 224 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 TMEM255BQ8WV15 326 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 TMEM239Q8WW34 195 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 RND1Q92730 232 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
NUP50-216ENST00000486184 KTI12Q96EK9 354 aaPredicted RBP10.21□□□□□ -0.77
NUP50-216ENST00000486184 C7orf34Q96L11 122 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 ZFP3Q96NJ6 502 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 ASPNQ9BXN1 380 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 SRXN1Q9BYN0 137 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 SLC19A3Q9BZV2 496 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 ANKRD19PQ9H560 264 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 KRCC1Q9NPI7 259 aaPredicted RBP10.21□□□□□ -0.77
NUP50-216ENST00000486184 COQ3Q9NZJ6 369 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 NDUFAF4Q9P032 175 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 CLCF1Q9UBD9 225 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 MED31Q9Y3C7 131 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 TESMINQ9Y4I5 508 aa10.21□□□□□ -0.77
NUP50-216ENST00000486184 MYO7BQ6PIF6 2116 aa10.21□□□□□ -0.78
NUP50-216ENST00000486184 MBD3L4A6NDZ8 208 aaPredicted RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 MBD3L3A6NE82 208 aaPredicted RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 MBD3L5A6NJ08 208 aaPredicted RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 LIPT2A6NK58 231 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 HSPB2A8KAH6 182 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 GNGT2O14610 69 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 GADD45GO95257 159 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 MT-ND1P03886 318 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 THY1P04216 161 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 HIST1H2ABP04908 130 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 GLI4P10075 376 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 IMPDH2P12268 514 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 NQO1P15559 274 aaKnown RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 FPR1P21462 350 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 RRM2P31350 389 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 TIMP3P35625 211 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 CTBP2P56545 445 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 IL1RL1Q01638 556 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 RNPS1Q15287 305 aaKnown RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 HSPB2Q16082 182 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 OTUD3Q5T2D3 398 aaPredicted RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 RIPPLY2Q5TAB7 128 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 LINC00114Q6XXX2 140 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 WDR88Q6ZMY6 472 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 HIST3H2AQ7L7L0 130 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 PIWIL3Q7Z3Z3 882 aaKnown RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 ADGRE4PQ86SQ3 457 aa10.2□□□□□ -0.78
NUP50-216ENST00000486184 TSPYL5Q86VY4 417 aaPredicted RBP10.2□□□□□ -0.78
NUP50-216ENST00000486184 NKAIN4Q8IVV8 208 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms