RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SLC35A4Q96G79 324 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 C16orf58Q96GQ5 468 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 WDYHV1Q96HA8 205 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 HRASLS5Q96KN8 279 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 PRRC1Q96M27 445 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ALPK1Q96QP1 1244 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 TUBA1CQ9BQE3 449 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ITPAQ9BY32 194 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 ANGPTL4Q9BY76 406 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 POLDIP3Q9BY77 421 aaKnown RBP8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 SAP130Q9H0E3 1048 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC38A1Q9H2H9 487 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 UBQLN3Q9H347 655 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 MAT2BQ9NZL9 334 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 CNIH4Q9P003 139 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 CAMK2AQ9UQM7 478 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 PLEKHA6Q9Y2H5 1048 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 GMPPBQ9Y5P6 360 aa8.49□□□□□ -1.05
TMEM39A-208ENST00000486159 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 FAM221AA4D161 298 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 PRAMEF25A6NGN4 478 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 MPZL2O60487 215 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 STX11O75558 287 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 UGT2B17O75795 530 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 EPPINO95925 133 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 CBX7O95931 251 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 HPNP05981 417 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 DBIP07108 87 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 GABRA1P14867 456 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ABCD3P28288 659 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 IFNGR2P38484 337 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 KIR2DL3P43628 341 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 STARP49675 285 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ISL1P61371 349 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 FUT5Q11128 374 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 COX10Q12887 443 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 TOMM20Q15388 145 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 EXOC3L2Q2M3D2 409 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 TRMT12Q53H54 448 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 VASNQ6EMK4 673 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF773Q6PK81 442 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 CD300LDQ6UXZ3 194 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 CDC20BQ86Y33 519 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 GALNT12Q8IXK2 581 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 OFCC1Q8IZS5 231 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 VWA5B2Q8N398 1253 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 C9orf106Q8NAJ2 232 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 OR52P1PQ8NH57 321 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 HGDQ93099 445 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC35B4Q969S0 331 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 TP53INP1Q96A56 240 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ART5Q96L15 291 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 TRIB1Q96RU8 372 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 SDF2Q99470 211 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 FEVQ99581 238 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ARHGDIGQ99819 225 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 LMF2Q9BU23 707 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 FNDC11Q9BVV2 318 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 DGCR6LQ9BY27 220 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF350Q9GZX5 532 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 RIBC2Q9H4K1 309 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 NMNAT1Q9HAN9 279 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 CCNB1IP1Q9NPC3 277 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 RASSF1Q9NS23 344 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 SCN3BQ9NY72 215 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ST6GALNAC2Q9UJ37 374 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 CBLCQ9ULV8 474 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 TPRKBQ9Y3C4 175 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 WDR45Q9Y484 360 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 PCDHGB5Q9Y5G0 923 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 MPDZO75970 2070 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 VPS13CQ709C8 3753 aa8.48□□□□□ -1.05
TMEM39A-208ENST00000486159 ANKRD33BA6NCL7 494 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 AGAP5A6NIR3 686 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 OR6C76A6NM76 312 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF701M0R085 212 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 DYRK3O43781 588 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 FMO6PO60774 539 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 NKX2-2O95096 273 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 ACP2P11117 423 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 ATP6V1B1P15313 513 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 JUNBP17275 347 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 TNFRSF1BP20333 461 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 GSTM3P21266 225 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 RPS4Y1P22090 263 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CBLP22681 906 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CRHBPP24387 322 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 MASP1P48740 699 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 PSMD4P55036 377 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 PSPHP78330 225 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 RPP38P78345 283 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 POU6F2P78424 691 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CHRNEQ04844 493 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 PPP1R8Q12972 351 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CDK5R2Q13319 367 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 POU4F3Q15319 338 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC25A35Q3KQZ1 300 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 HLA-DQA1Q5Y7H0 255 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 OR5M10Q6IEU7 315 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 ZNF770Q6IQ21 691 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms