RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 EPS8Q12929 822 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 STX3Q13277 289 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 SLC17A1Q14916 467 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 MRPL2Q5T653 305 aaKnown RBP16.86■□□□□ 0.29
COL27A1-205ENST00000485397 ZNF621Q6ZSS3 439 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 LRRC34Q8IZ02 419 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 ZNF525Q8N782 197 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 PNPT1Q8TCS8 783 aaKnown RBP16.86■□□□□ 0.29
COL27A1-205ENST00000485397 PMM1Q92871 262 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 MTHFD2LQ9H903 347 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-205ENST00000485397 SSU72Q9NP77 194 aaKnown RBP16.86■□□□□ 0.29
COL27A1-205ENST00000485397 AIG1Q9NVV5 245 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 PARPBPQ9NWS1 579 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.86■□□□□ 0.297e-20■■□□□ 13.8
COL27A1-205ENST00000485397 DCTN4Q9UJW0 460 aa16.86■□□□□ 0.29
COL27A1-205ENST00000485397 V9GYY5 206 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-205ENST00000485397 CFAP73A6NFT4 308 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 RNF212BA8MTL3 300 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 SDHDO14521 159 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 TM9SF1O15321 606 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 SNUPNO95149 360 aaKnown RBP16.85■□□□□ 0.29
COL27A1-205ENST00000485397 NR2F1P10589 423 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 IL7RP16871 459 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 RPS4Y1P22090 263 aaKnown RBP16.85■□□□□ 0.29
COL27A1-205ENST00000485397 TMEM249Q2WGJ8 235 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 CHRFAM7AQ494W8 412 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 C6orf52Q5T4I8 152 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 OGFOD2Q6N063 350 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 ZNF544Q6NX49 715 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 WDR93Q6P2C0 686 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 PODNL1Q6PEZ8 512 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 PAQR6Q6TCH4 344 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 MREGQ8N565 214 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 TRIML2Q8N7C3 387 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 TMEM99Q8N816 258 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 TNFRSF13CQ96RJ3 184 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 ADAM19Q9H013 955 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 MANSC1Q9H8J5 431 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 KCNK9Q9NPC2 374 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 RLIMQ9NVW2 624 aa16.85■□□□□ 0.29
COL27A1-205ENST00000485397 FBN3Q75N90 2809 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 ELOA3DA6NLF2 546 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-205ENST00000485397 H7C417 338 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 FAAHO00519 579 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 AKR7A3O95154 331 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 IFNA2P01563 188 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 PGRP06401 933 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 GKN3PP0CG01 181 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 DSCR9P59020 149 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 LOXL1Q08397 574 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-205ENST00000485397 BST1Q10588 318 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 CEACAM7Q14002 265 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 MAPK11Q15759 364 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 ELOA3BQ3SY89 546 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 OTUD3Q5T2D3 398 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-205ENST00000485397 C17orf78Q8N4C9 275 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 ZIC4Q8N9L1 334 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 C1orf162Q8NEQ5 155 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-205ENST00000485397 ELOA3Q8NG57 546 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 NANOS1Q8WY41 292 aaKnown RBP16.84■□□□□ 0.29
COL27A1-205ENST00000485397 ZNF385AQ96PM9 386 aaKnown RBP16.84■□□□□ 0.29
COL27A1-205ENST00000485397 OR52E6Q96RD3 313 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 AMDHD2Q9Y303 409 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 GPR45Q9Y5Y3 372 aa16.84■□□□□ 0.29
COL27A1-205ENST00000485397 HEATR1Q9H583 2144 aaKnown RBP16.84■□□□□ 0.29
COL27A1-205ENST00000485397 LIPT2A6NK58 231 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 ATP6V1G2-DDX39BF2Z307 99 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 LY6HO94772 140 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 DBIP07108 87 aaKnown RBP16.83■□□□□ 0.28
COL27A1-205ENST00000485397 CDH2P19022 906 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-205ENST00000485397 MPGP29372 298 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 ANXA11P50995 505 aaKnown RBP16.83■□□□□ 0.28
COL27A1-205ENST00000485397 TXNL4AP83876 142 aaKnown RBP16.83■□□□□ 0.28
COL27A1-205ENST00000485397 GNA13Q14344 377 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 OR7A5Q15622 319 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 AAED1Q7RTV5 226 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 VRK2Q86Y07 508 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 KIRREL3Q8IZU9 778 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 OR9K2Q8NGE7 335 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 TMEM45BQ96B21 275 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 PAIP2Q9BPZ3 127 aaKnown RBP16.83■□□□□ 0.28
COL27A1-205ENST00000485397 CENPHQ9H3R5 247 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 WDR55Q9H6Y2 383 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-205ENST00000485397 FKRPQ9H9S5 495 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 SLC6A13Q9NSD5 602 aa16.83■□□□□ 0.28
COL27A1-205ENST00000485397 KLF11O14901 512 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 UQCRBP14927 111 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 SLC25A16P16260 332 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 CXCR1P25024 350 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 APOBEC3AP31941 199 aaPredicted RBP16.82■□□□□ 0.28
COL27A1-205ENST00000485397 ACAA2P42765 397 aaKnown RBP16.82■□□□□ 0.28
COL27A1-205ENST00000485397 MAP2K6P52564 334 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 PRPS1P60891 318 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 VLDLRP98155 873 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 TGFBR3Q03167 851 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 BNIP2Q12982 314 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 GSTA3Q16772 222 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 HIKESHIQ53FT3 197 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 ZNF836Q6ZNA1 936 aa16.82■□□□□ 0.28
COL27A1-205ENST00000485397 SPATA19Q7Z5L4 167 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms