RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ZSWIM7Q19AV6 140 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 OTUD3Q5T2D3 398 aaPredicted RBP10.87□□□□□ -0.67
MSH5-216ENST00000484309 METTL21CQ5VZV1 264 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 BHLHA15Q7RTS1 189 aaPredicted RBP10.87□□□□□ -0.67
MSH5-216ENST00000484309 ATG4DQ86TL0 474 aaPredicted RBP10.87□□□□□ -0.67
MSH5-216ENST00000484309 KRT73Q86Y46 540 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 UBE2J2Q8N2K1 259 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 TMEM99Q8N816 258 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 SMYD1Q8NB12 490 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 HIPK4Q8NE63 616 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 STEAP2Q8NFT2 490 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 RNF217Q8TC41 542 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 KISS1RQ969F8 398 aaPredicted RBP10.87□□□□□ -0.67
MSH5-216ENST00000484309 PLPPR2Q96GM1 343 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 WFDC6Q9BQY6 131 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 NAA11Q9BSU3 229 aaPredicted RBP10.87□□□□□ -0.67
MSH5-216ENST00000484309 TMEM38AQ9H6F2 299 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 ADPRHL2Q9NX46 363 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 RPS6KB2Q9UBS0 482 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 TRAPPC4Q9Y296 219 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 GMEB1Q9Y692 573 aa10.87□□□□□ -0.67
MSH5-216ENST00000484309 IGKV3D-15A0A087WSY6 115 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 LIPT2A6NK58 231 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 ELOA3DA6NLF2 546 aaPredicted RBP10.86□□□□□ -0.67
MSH5-216ENST00000484309 A8MVM7 634 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 TMEM229AB2RXF0 380 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 KLF4O43474 513 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 DNPH1O43598 174 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 PLAUP00749 431 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 GPIP06744 558 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 IGHV1-2P23083 117 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 RGS8P57771 180 aaPredicted RBP10.86□□□□□ -0.67
MSH5-216ENST00000484309 H3F3AP84243 136 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 DMTNQ08495 405 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 KLF10Q13118 480 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 ITGADQ13349 1161 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 PDK3Q15120 406 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 TAB1Q15750 504 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 STK11Q15831 433 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 ELOA3BQ3SY89 546 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 BEX5Q5H9J7 111 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 C1orf140Q5VVS0 124 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 REP15Q6BDI9 236 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 DHRS4L2Q6PKH6 230 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 CASP12Q6UXS9 341 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 Q6ZT83 130 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 GPAT4Q86UL3 456 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 SNX32Q86XE0 403 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 ARMC8Q8IUR7 673 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 P3H2Q8IVL5 708 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 C11orf65Q8NCR3 313 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 ELOA3Q8NG57 546 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 OR10A6Q8NH74 314 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 TSPEARQ8WU66 669 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 APH1AQ96BI3 265 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 SLC25A36Q96CQ1 311 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 ZNF607Q96SK3 696 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 SPATA5L1Q9BVQ7 753 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 TAPBPLQ9BX59 468 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 POTEKPQ9BYX7 375 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 MED4Q9NPJ6 270 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 SAR1AQ9NR31 198 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 FLVCR1Q9Y5Y0 555 aa10.86□□□□□ -0.67
MSH5-216ENST00000484309 LOC100653049A0A140TA62 436 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 A0A1B0GWA3 101 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 M0R3H8 397 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 GPR171O14626 319 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 MRASO14807 208 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 EIF1BO60739 113 aaKnown RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 MRPL33O75394 65 aaKnown RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 RAD51DO75771 328 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 KRT34O76011 436 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 AHSA1O95433 338 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 CD53P19397 219 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 MDH1P40925 334 aaKnown RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 RPS5P46782 204 aaKnown RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 MAP2K6P52564 334 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 SLC16A1P53985 500 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 FOXG1P55316 489 aaPredicted RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 NCALDP61601 193 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 P2RY6Q15077 328 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 DEFB113Q30KQ7 82 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 TRMT5Q32P41 509 aaKnown RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 MMEL1Q495T6 779 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 RABL3Q5HYI8 236 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 C9orf135Q5VTT2 229 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 PAQR6Q6TCH4 344 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 SPNS3Q6ZMD2 512 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 OR52E4Q8NGH9 312 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 KTI12Q96EK9 354 aaPredicted RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 FOXC2Q99958 501 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 KAT8Q9H7Z6 458 aaKnown RBP10.85□□□□□ -0.67
MSH5-216ENST00000484309 ARMCX1Q9P291 453 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 SEC14L4Q9UDX3 406 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 SLC13A4Q9UKG4 626 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 EDARQ9UNE0 448 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 USP22Q9UPT9 525 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 ACANP16112 2415 aa10.85□□□□□ -0.67
MSH5-216ENST00000484309 FLNAP21333 2647 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms