RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 FBXL4Q9UKA2 621 aa5.9□□□□□ -1.46
CLK1-212ENST00000482590 NXT1Q9UKK6 140 aaKnown RBP5.9□□□□□ -1.46
CLK1-212ENST00000482590 AMFRQ9UKV5 643 aa5.9□□□□□ -1.46
CLK1-212ENST00000482590 SH3GLB1Q9Y371 365 aa5.9□□□□□ -1.46
CLK1-212ENST00000482590 CSMD1Q96PZ7 3565 aa5.9□□□□□ -1.47
CLK1-212ENST00000482590 GTF3C1Q12789 2109 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 ANKRD17O75179 2603 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 TCRBV7S3A2A0A539 114 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 CCDC162PA2VCL2 907 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 ERI2A8K979 691 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 HSPB2A8KAH6 182 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 MIF4GDA9UHW6 222 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 SUPT3HB4E1H0 165 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 HCRTR1O43613 425 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SAP30O75446 220 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 GOT2P00505 430 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 MT-ND1P03886 318 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 CSN3P07498 182 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 RRASP10301 218 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 PAICSP22234 425 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 MMP11P24347 488 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 GRIA1P42261 906 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 TSFMP43897 325 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 MTCP1P56278 107 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SUMO2P61956 95 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 FUT7Q11130 342 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 KLF9Q13886 244 aaPredicted RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 HSPB2Q16082 182 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 CARTPTQ16568 116 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 FAM83EQ2M2I3 478 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 AARS2Q5JTZ9 985 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 SEL1L2Q5TEA6 688 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 LRRC8BQ6P9F7 803 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 FAM159AQ6UWV7 190 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 NLRP9Q7RTR0 991 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SLC16A9Q7RTY1 509 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 KIAA1328Q86T90 577 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 YRDCQ86U90 279 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 KLHDC8BQ8IXV7 354 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 UBQLNLQ8IYU4 475 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SLC22A15Q8IZD6 547 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 LRRC75A-AS1Q8N1F1 130 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 DNAJC22Q8N4W6 341 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 METTL27Q8N6F8 245 aaPredicted RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 OR4N2Q8NGD1 307 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 OR2L8Q8NGY9 312 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 FLVCR1-AS1Q8TAF5 88 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 PAQR8Q8TEZ7 354 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 MITD1Q8WV92 249 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SKA2Q8WVK7 121 aaPredicted RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 ASZ1Q8WWH4 475 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 ANKRD7Q92527 254 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 OSTF1Q92882 214 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 EMG1Q92979 244 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 RAD51AP1Q96B01 352 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 FBXL8Q96CD0 374 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 HAVCR1Q96D42 359 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 ZNF48Q96MX3 618 aaPredicted RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 FOPNLQ96NB1 174 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 OR1F2PQ96R84 312 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SELENOSQ9BQE4 189 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 ALKBH7Q9BT30 221 aaPredicted RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 TMEM121Q9BTD3 319 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 IFT27Q9BW83 186 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SF3B5Q9BWJ5 86 aaKnown RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 LHPPQ9H008 270 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 SLC26A1Q9H2B4 701 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 WDR54Q9H977 334 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 ZBTB20Q9HC78 741 aaPredicted RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 RDH8Q9NYR8 311 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 RHCGQ9UBD6 479 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 CIDEBQ9UHD4 219 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 GAB2Q9UQC2 676 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 NTNG1Q9Y2I2 539 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 CSAG2Q9Y5P2 127 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 HS3ST3B1Q9Y662 390 aa5.89□□□□□ -1.47
CLK1-212ENST00000482590 NCOA6Q14686 2063 aaPredicted RBP5.89□□□□□ -1.47
CLK1-212ENST00000482590 A0A0J9YVX5 310 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 BTNL10A8MVZ5 291 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 OR1I1O60431 355 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 FCMRO60667 390 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PRAF2O60831 178 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 CDH16O75309 829 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 OR4F21O95013 312 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 RFPL3SP0C7P2 107 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 PRPS2P11908 318 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 ETFAP13804 333 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 CCR7P32248 378 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 HSD17B3P37058 310 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 FDFT1P37268 417 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 BDKRB1P46663 353 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 FNTAP49354 379 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 TTPAP49638 278 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 BLVRAP53004 296 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 VSX2P58304 361 aaPredicted RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 ARG2P78540 354 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 MRPS15P82914 257 aaKnown RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 CCZ1BP86790 482 aa5.88□□□□□ -1.47
CLK1-212ENST00000482590 CCZ1P86791 482 aaPredicted RBP5.88□□□□□ -1.47
CLK1-212ENST00000482590 MELKQ14680 651 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms