RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 TMEM225Q6GV28 225 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 P2RY8Q86VZ1 359 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 CLIP4Q8N3C7 705 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 ELOA3Q8NG57 546 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 NFKBIDQ8NI38 313 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 FBXW5Q969U6 566 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 ZNF607Q96SK3 696 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 ADAM19Q9H013 955 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 NPHS2Q9NP85 383 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 TMEM45AQ9NWC5 275 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 ADPRHL2Q9NX46 363 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 LEF1Q9UJU2 399 aaPredicted RBP13.57□□□□□ -0.24
CDK9-203ENST00000480353 DCTN4Q9UJW0 460 aa13.57□□□□□ -0.24
CDK9-203ENST00000480353 ZC3H12DA2A288 527 aaKnown RBP13.56□□□□□ -0.24
CDK9-203ENST00000480353 ZNF716A6NP11 495 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 ANGPT2O15123 496 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 AKR7A3O95154 331 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 PGM3O95394 542 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 IMPDH2P12268 514 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 ETS2P15036 469 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 IGHV1-2P23083 117 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 SLC6A2P23975 617 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 LOXP28300 417 aaPredicted RBP13.56□□□□□ -0.24
CDK9-203ENST00000480353 ACAA2P42765 397 aaKnown RBP13.56□□□□□ -0.24
CDK9-203ENST00000480353 SLC16A1P53985 500 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 CDK6Q00534 326 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 BNIP2Q12982 314 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 MAPK11Q15759 364 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 TIMM23BQ5SRD1 257 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 NCMAPQ5T1S8 102 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 LRIF1Q5T3J3 769 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 FUNDC1Q8IVP5 155 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 SIKE1Q9BRV8 207 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 BCL2L10Q9HD36 194 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 ANGPT4Q9Y264 503 aa13.56□□□□□ -0.24
CDK9-203ENST00000480353 RAI1Q7Z5J4 1906 aaPredicted RBP13.55□□□□□ -0.24
CDK9-203ENST00000480353 A0A0G2JND7 137 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 A0A1W2PP18 115 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 SERPINB7O75635 380 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 AHSA1O95433 338 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 ARAFP10398 606 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 RPS4XP62701 263 aaKnown RBP13.55□□□□□ -0.24
CDK9-203ENST00000480353 TGFBR3Q03167 851 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 BSPH1Q075Z2 132 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 SCARB2Q14108 478 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 PAGE3Q5JUK9 113 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 C1orf140Q5VVS0 124 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 AAED1Q7RTV5 226 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 ABHD12BQ7Z5M8 362 aaPredicted RBP13.55□□□□□ -0.24
CDK9-203ENST00000480353 YTHDF3Q7Z739 585 aaKnown RBP13.55□□□□□ -0.24
CDK9-203ENST00000480353 ZNF433Q8N7K0 673 aaPredicted RBP13.55□□□□□ -0.24
CDK9-203ENST00000480353 ZNF611Q8N823 705 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 GTPBP3Q969Y2 492 aaKnown RBP13.55□□□□□ -0.24
CDK9-203ENST00000480353 SLC25A37Q9NYZ2 338 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 VAPAQ9P0L0 249 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 POU2F3Q9UKI9 436 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 LAMP3Q9UQV4 416 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 NDUFAF1Q9Y375 327 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 FLVCR1Q9Y5Y0 555 aa13.55□□□□□ -0.24
CDK9-203ENST00000480353 ARID1AO14497 2285 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 PRORSD1PA6NEY8 169 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 LIPT2A6NK58 231 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 FRS3O43559 492 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 RAMP1O60894 148 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 TMCC2O75069 709 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 BMP2P12643 396 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 PRG2P13727 222 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 H2AFXP16104 143 aaPredicted RBP13.54□□□□□ -0.24
CDK9-203ENST00000480353 COX5AP20674 150 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 PRKAR1BP31321 381 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 PTH2RP49190 550 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 H3F3AP84243 136 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 IL1RL1Q01638 556 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 CYP51A1Q16850 503 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 C9orf135Q5VTT2 229 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 ADAM5Q6NVV9 412 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 KLHL24Q6TFL4 600 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 DHDDSQ86SQ9 333 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 DEPDC4Q8N2C3 294 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
CDK9-203ENST00000480353 TMEM99Q8N816 258 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 BHLHE22Q8NFJ8 381 aaPredicted RBP13.54□□□□□ -0.24
CDK9-203ENST00000480353 OR52N5Q8NH56 324 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 SLC35B4Q969S0 331 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 C3orf49Q96BT1 292 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 SLC25A36Q96CQ1 311 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 TRMT61AQ96FX7 289 aaKnown RBP13.54□□□□□ -0.24
CDK9-203ENST00000480353 C18orf12Q96KH6 178 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 Q96MF0 132 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 BDH2Q9BUT1 245 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 SF3B5Q9BWJ5 86 aaKnown RBP13.54□□□□□ -0.24
CDK9-203ENST00000480353 ALG2Q9H553 416 aa13.54□□□□□ -0.24
CDK9-203ENST00000480353 FAIMQ9NVQ4 179 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms