RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	TMEM229A	B2RXF0	380 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	PDLIM1	O00151	329 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	FRS3	O43559	492 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	EIF1B	O60739	113 aa	Known RBP	13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	PTH2R	P49190	550 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	HOXC5	Q00444	222 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	BSPH1	Q075Z2	132 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	CAPRIN1	Q14444	709 aa	Known RBP	13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	SLC17A1	Q14916	467 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	LARS2	Q15031	903 aa	Known RBP	13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	STK11	Q15831	433 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	PAQR6	Q6TCH4	344 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	HDX	Q7Z353	690 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	P3H2	Q8IVL5	708 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	CADM2	Q8N3J6	435 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	BBS10	Q8TAM1	723 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	DYDC1	Q8WWB3	177 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	CKAP2	Q8WWK9	683 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	C18orf12	Q96KH6	178 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	USB1	Q9BQ65	265 aa	Known RBP	13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	RAD21L1	Q9H4I0	556 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF385D	Q9H6B1	395 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	INTS9	Q9NV88	658 aa	Known RBP	13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	PRDM4	Q9UKN5	801 aa		13.25	□□□□□ -0.29
CCNL1-222	ENST00000479596	OR5H1	A6NKK0	313 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	GPR171	O14626	319 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	CLOCK	O15516	846 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ARHGEF9	O43307	516 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	NPIPB7	O75200	414 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	SASH3	O75995	380 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	CD3E	P07766	207 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ITGA5	P08648	1049 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ARAF	P10398	606 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	GGT1	P19440	569 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	CXCR1	P25024	350 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	IDUA	P35475	653 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	P2RY4	P51582	365 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	CEACAM7	Q14002	265 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	SQLE	Q14534	574 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	PPA1	Q15181	289 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	OR7A5	Q15622	319 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZSWIM7	Q19AV6	140 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	AGK	Q53H12	422 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF311	Q5JNZ3	666 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	TIMM23B	Q5SRD1	257 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	PRSS57	Q6UWY2	283 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	YTHDF3	Q7Z739	585 aa	Known RBP	13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	CIART	Q8N365	385 aa	Predicted RBP	13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	TMEM99	Q8N816	258 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZIC4	Q8N9L1	334 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	KBTBD8	Q8NFY9	601 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	OR52E4	Q8NGH9	312 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	NFKBID	Q8NI38	313 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	STON2	Q8WXE9	905 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	THOC1	Q96FV9	657 aa	Known RBP	13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	MAGEB18	Q96M61	343 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ESRP2	Q9H6T0	727 aa	Known RBP	13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF701	Q9NV72	531 aa	Predicted RBP	13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	TMEM45A	Q9NWC5	275 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	SLC9A8	Q9Y2E8	581 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	IFT52	Q9Y366	437 aa		13.24	□□□□□ -0.29
CCNL1-222	ENST00000479596	TMEM247	A6NEH6	219 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	AQP7P3	A6NL99	342 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596		A8MVM7	634 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	MRPL33	O75394	65 aa	Known RBP	13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	RAD51D	O75771	328 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	AKR7A3	O95154	331 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	GPI	P06744	558 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	SOD3	P08294	240 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	DANCR	P0C864	163 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	ETS2	P15036	469 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	COPZ1	P61923	177 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	ADRM1	Q16186	407 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF672	Q499Z4	452 aa	Predicted RBP	13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	GCNT6	Q5T4J0	391 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	CASP12	Q6UXS9	341 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	DLEU7	Q6UYE1	221 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	UBE2J2	Q8N2K1	259 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	OR9K2	Q8NGE7	335 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	TMEM171	Q8WVE6	324 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	SLC35B4	Q969S0	331 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	TMEM45B	Q96B21	275 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	POM121	Q96HA1	1249 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596		Q96MF0	132 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	NAA11	Q9BSU3	229 aa	Predicted RBP	13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	TRIM2	Q9C040	744 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	NGB	Q9NPG2	151 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	SLC7A10	Q9NS82	523 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	ASB6	Q9NWX5	421 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596	ZNF232	Q9UNY5	417 aa		13.23	□□□□□ -0.29
CCNL1-222	ENST00000479596		A0A1W2PP18	115 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	TRIM64	A6NGJ6	449 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	TRIM64B	A6NI03	449 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	SHISA9	B4DS77	424 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	FTCDNL1	E5RQL4	147 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	INHBB	P09529	407 aa		13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	HOXB4	P17483	251 aa	Predicted RBP	13.22	□□□□□ -0.29
CCNL1-222	ENST00000479596	GPX2	P18283	190 aa		13.22	□□□□□ -0.29

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