RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 TESQ9UGI8 421 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-208ENST00000477928 CHST2Q9Y4C5 530 aa12.27□□□□□ -0.45
SOX2-OT-208ENST00000477928 FREM1Q5H8C1 2179 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 TMEM72A0PK05 275 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 FMO6PO60774 539 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 VAMP5O95183 116 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 ATE1O95260 518 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 GPIP06744 558 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 FESP07332 822 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 GKN3PP0CG01 181 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 CCNA2P20248 432 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 CRYGSP22914 178 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 KLF10Q13118 480 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 CYP51A1Q16850 503 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 PAQR6Q6TCH4 344 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 GALNT5Q7Z7M9 940 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 PATL1Q86TB9 770 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 ATG4DQ86TL0 474 aaPredicted RBP12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 CLIP4Q8N3C7 705 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 STEAP2Q8NFT2 490 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 RP9Q8TA86 221 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 C10orf82Q8WW14 230 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 LRRC58Q96CX6 371 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 PIK3IP1Q96FE7 263 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 ARL5BQ96KC2 179 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 ZNF300Q96RE9 604 aaPredicted RBP12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 SF3B5Q9BWJ5 86 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 TRIM2Q9C040 744 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR11A1Q9GZK7 315 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 SLC13A4Q9UKG4 626 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 CAPN7Q9Y6W3 813 aa12.26□□□□□ -0.45
SOX2-OT-208ENST00000477928 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 ZNF814B7Z6K7 855 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR2T1O43869 369 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 RAMP1O60894 148 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 FZD7O75084 574 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 MFN2O95140 757 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 PNMTP11086 282 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 IDUAP35475 653 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR3A2P47893 321 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 VEZF1Q14119 521 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 ALKBH2Q6NS38 261 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 ERICH5Q6P6B1 374 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 Q6ZT83 130 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 CCDC80Q76M96 950 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 PTOV1Q86YD1 416 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 ARMC8Q8IUR7 673 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 GABRG1Q8N1C3 465 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 C10orf111Q8N326 155 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 CADM2Q8N3J6 435 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 C3orf49Q96BT1 292 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 TAPBPLQ9BX59 468 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 CXXC4Q9H2H0 198 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 PARPBPQ9NWS1 579 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 RPS6KB2Q9UBS0 482 aa12.25□□□□□ -0.45
SOX2-OT-208ENST00000477928 TMEM229AB2RXF0 380 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 FBP2O00757 339 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 NPIPB7O75200 414 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 PLAUP00749 431 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 CD53P19397 219 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 PCGF2P35227 344 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 MTPNP58546 118 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 NCALDP61601 193 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 MFSD13AQ14CX5 517 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 REP15Q6BDI9 236 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 NANOGP8Q6NSW7 305 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 ULK3Q6PHR2 472 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 ARPINQ7Z6K5 226 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 RANBP3LQ86VV4 465 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 CXorf67Q86X51 503 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR6S1Q8NH40 331 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 RSPO3Q9BXY4 272 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 NSRP1Q9H0G5 558 aaKnown RBP12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 NANOGQ9H9S0 305 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 TMEM27Q9HBJ8 222 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 SELENONQ9NZV5 590 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 PRSS50Q9UI38 385 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 SLC9A8Q9Y2E8 581 aa12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 SETD2Q9BYW2 2564 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-208ENST00000477928 LIPT2A6NK58 231 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 ZNF716A6NP11 495 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 MRASO14807 208 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 GCM2O75603 506 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 LGI1O95970 557 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 IFNA14P01570 189 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 RAF1P04049 648 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 IMPDH2P12268 514 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 PRG2P13727 222 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 DNASE1P24855 282 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 GZMMP51124 257 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 NR1H2P55055 460 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 OR2B6P58173 313 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 ITGADQ13349 1161 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 VMACQ2NL98 169 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 SFRP5Q5T4F7 317 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 P2RY8Q86VZ1 359 aa12.23□□□□□ -0.45
SOX2-OT-208ENST00000477928 KRTAP1-3Q8IUG1 177 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms