RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GLYR1Q49A26 553 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 UNC50Q53HI1 259 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 SH2D4BQ5SQS7 431 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 METTL2BQ6P1Q9 378 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 TMEM107Q6UX40 140 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF551Q7Z340 670 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 TUSC5Q8IXB3 177 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 GTPBP8Q8N3Z3 284 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 PRR18Q8N4B5 295 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF525Q8N782 197 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 GATSQ8NAP1 163 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 FAM156AQ8NDB6 213 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 VPS37AQ8NEZ2 397 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 OR4C3Q8NH37 302 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 OR2V1Q8NHB1 315 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 NRG4Q8WWG1 115 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 SELENOMQ8WWX9 145 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 PIK3R3Q92569 461 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF75CPQ92670 426 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 CDKL2Q92772 493 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ERP27Q96DN0 273 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 MTBPQ96DY7 904 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 GIMAP5Q96F15 307 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 RNF145Q96MT1 663 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 TNFRSF13CQ96RJ3 184 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 EBPLQ9BY08 206 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ACPTQ9BZG2 426 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 OR10A4Q9H209 315 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 GLIPR2Q9H4G4 154 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 CXorf36Q9H7Y0 433 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 COQ10BQ9H8M1 238 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 BRF2Q9HAW0 419 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 SLC35C2Q9NQQ7 365 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 MED17Q9NVC6 651 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 AHSPQ9NZD4 102 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 TXNDC16Q9P2K2 825 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 XPR1Q9UBH6 696 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 VPS29Q9UBQ0 182 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ABCG2Q9UNQ0 655 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 C19orf53Q9UNZ5 99 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 GPR52Q9Y2T5 361 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF780BQ9Y6R6 833 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 A0A087WV62 115 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 IGHV3-15A0A0B4J1V0 119 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 GOLGA8QA0A0J9YX86 632 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 A0A1W2PP18 115 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 GOLGA8OA6NCC3 632 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 C9JVG2 144 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 GOLGA8NF8WBI6 632 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CCDC188H7C350 402 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 GOLGA8RI6L899 631 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 PCDH7O60245 1069 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 GUCY1B2O75343 617 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 BCAS2O75934 225 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 LYZL6O75951 148 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 OXSR1O95747 527 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CHEK2O96017 543 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ADAP00813 363 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TUBBP07437 444 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 GSTA2P09210 222 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 LINGO3P0C6S8 592 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ACP2P11117 423 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 FCGR2AP12318 317 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF17P17021 662 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 PEX2P28328 305 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TIA1P31483 386 aaKnown RBP eCLIP4.01□□□□□ -1.772e-18■■□□□ 13.7
CKS1B-207ENST00000477676 GABRA3P34903 492 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 SFTPDP35247 375 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ARL1P40616 181 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 RFX3P48380 749 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 PRIM2P49643 509 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CASP9P55211 416 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 FOXA1P55317 472 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CTBP2P56545 445 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 MRPS22P82650 360 aaKnown RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 SLC18A2Q05940 514 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ILF2Q12905 390 aaKnown RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CD226Q15762 336 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TOMM34Q15785 309 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 SGCBQ16585 318 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CPTPQ5TA50 214 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 PXDC1Q5TGL8 231 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 RNF220Q5VTB9 566 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF626Q68DY1 528 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 HBMQ6B0K9 141 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 TTC19Q6DKK2 380 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 FAM71E1Q6IPT2 247 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 BHLHA15Q7RTS1 189 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CCDC25Q86WR0 208 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 FAM9CQ8IZT9 166 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 OR2L13Q8N349 312 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 CEP112Q8N8E3 955 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 STEAP2Q8NFT2 490 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 FAM110BQ8TC76 370 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 RNF128Q8TEB7 428 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 C10orf105Q8TEF2 133 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 LRTOMTQ8WZ04 291 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 OSTF1Q92882 214 aa4.01□□□□□ -1.77
CKS1B-207ENST00000477676 ATP6V1E2Q96A05 226 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms