RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 JAM3Q9BX67 310 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 PBX4Q9BYU1 374 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 FXYD6Q9H0Q3 95 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 LINC00597Q9H2U6 94 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ASB8Q9H765 288 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CA10Q9NS85 328 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 FAM212BQ9NTI7 297 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CLEC2DQ9UHP7 191 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ZDHHC8Q9ULC8 765 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 RPL36Q9Y3U8 105 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 TBC1D3FA6NER0 549 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 RPL36A-HNRNPH2H7BZ11 118 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 EREGO14944 169 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 SURF4O15260 269 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 OR1I1O60431 355 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 CLDN7O95471 211 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 CEBPBP17676 345 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 STAT5AP42229 794 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 PLA2G7Q13093 441 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 NFATC2Q13469 925 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 ELFN2Q5R3F8 820 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 TMEM71Q6P5X7 295 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 PTCHD4Q6ZW05 846 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 SLC16A14Q7RTX9 510 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 PTGR2Q8N8N7 351 aaPredicted RBP11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 OR1J4Q8NGS1 313 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 OR4K15Q8NH41 348 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 EXT2Q93063 718 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 ATOH8Q96SQ7 321 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 ZDHHC6Q9H6R6 413 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 FKRPQ9H9S5 495 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 ACKR4Q9NPB9 350 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 WNT6Q9Y6F9 365 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 NOTCH4Q99466 2003 aa11.71□□□□□ -0.53
RTFDC1-207ENST00000477573 TBC1D3DA0A087WVF3 549 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 ELOA3CA0A087WX78 387 aaPredicted RBP11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3IA0A087WXS9 549 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3EA0A087X179 549 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3KA0A087X1G2 549 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 A0A0A6YYC8 382 aaPredicted RBP11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 NAP1L6A6NFF2 107 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 SUPT3HB4E1H0 165 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TRDCB7Z8K6 153 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3LB9A6J9 549 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 I3L1I5 382 aaPredicted RBP11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 M0R143 59 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 FGF16O43320 207 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 CTNSO60931 367 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 CA3P07451 260 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 ACPPP15309 386 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 ACKR3P25106 362 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 AGTR1P30556 359 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 MAGEB1P43366 347 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 MMP15P51511 669 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 CAV3P56539 151 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 CLDN8P56748 225 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 PRR5P85299 388 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 PITPNAQ00169 270 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 SNTB2Q13425 540 aaKnown RBP11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 OR4D1Q15615 310 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 CTSL3PQ5NE16 218 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF626Q68DY1 528 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3CQ6IPX1 549 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 MED27Q6P2C8 311 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 SERPINA9Q86WD7 417 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 MSRB3Q8IXL7 192 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3Q8IZP1 549 aaPredicted RBP11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 FBXO39Q8N4B4 442 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 FAM98AQ8NCA5 519 aaKnown RBP11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 ING5Q8WYH8 240 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC25A28Q96A46 364 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 RGMAQ96B86 450 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 EID2BQ96D98 161 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 CMTM7Q96FZ5 175 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TGM7Q96PF1 710 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 DDA1Q9BW61 102 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 P2RY12Q9H244 342 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 UBQLN3Q9H347 655 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 MAN2C1Q9NTJ4 1040 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC25A37Q9NYZ2 338 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 RCC2Q9P258 522 aaKnown RBP11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 CRLS1Q9UJA2 301 aa11.71□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3BA6NDS4 549 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 DIRAS1O95057 198 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 F12P00748 615 aaPredicted RBP11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 CPT2P23786 658 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 AVPR2P30518 371 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 PCGF2P35227 344 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 MAS1LP35410 378 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 SRP9P49458 86 aaKnown RBP11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 TDGF1P3P51864 188 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 ZNF345Q14585 488 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 MELKQ14680 651 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 CDKN3Q16667 212 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 TBC1D3GQ6DHY5 549 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
RTFDC1-207ENST00000477573 ADIPOR2Q86V24 386 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms