RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	BCL2L11	O43521	198 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	EIF4E2	O60573	245 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	DNAJB6	O75190	326 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GPR32	O75388	356 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GRAP2	O75791	330 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	BEST1	O76090	585 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	UBXN7	O94888	489 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ABLIM3	O94929	683 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	NSA2	O95478	260 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CRH	P06850	196 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MELTF	P08582	738 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	IQCF3	P0C7M6	154 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF44	P15621	663 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MUC1	P15941	1255 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	EPCAM	P16422	314 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ELK1	P19419	428 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	HTR2C	P28335	458 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CD1C	P29017	333 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	EPHA2	P29317	976 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MAT2A	P31153	395 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	RPL3	P39023	403 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	KIR3DL2	P43630	455 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	AVPR1B	P47901	424 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CTSC	P53634	463 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SCAND1	P57086	179 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	DAOA	P59103	153 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZP1	P60852	638 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SORD	Q00796	357 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SSBP1	Q04837	148 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MBTD1	Q05BQ5	628 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	PJVK	Q0ZLH3	352 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC14A1	Q13336	389 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	IL10RA	Q13651	578 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	KLF9	Q13886	244 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CAPS	Q13938	189 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	BOP1	Q14137	746 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF460	Q14592	562 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	PTPRCAP	Q14761	206 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	INPP5J	Q15735	1006 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MAPK14	Q16539	360 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	PNLIPRP3	Q17RR3	467 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZSWIM7	Q19AV6	140 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GOLGA7B	Q2TAP0	167 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC39A12	Q504Y0	691 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	RAB6C	Q53S08	254 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	TMEM255A	Q5JRV8	349 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	FBXO47	Q5MNV8	452 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ACER2	Q5QJU3	275 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ARHGAP40	Q5TG30	622 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OTUD1	Q5VV17	481 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	AWAT2	Q6E213	333 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC27A1	Q6PCB7	646 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	C11orf88	Q6PI97	169 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF783	Q6ZMS7	281 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	TMEM91	Q6ZNR0	172 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ASB18	Q6ZVZ8	466 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CXXC5	Q7LFL8	322 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GPSM1	Q86YR5	675 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	DENND1C	Q8IV53	801 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SIAH3	Q8IW03	269 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GPR65	Q8IYL9	337 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GPR135	Q8IZ08	494 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	LNX2	Q8N448	690 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	HDDC3	Q8N4P3	179 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ARRDC1	Q8N5I2	433 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF283	Q8N7M2	679 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ARIH2OS	Q8N7S6	290 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	NKAIN3	Q8N8D7	197 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	HSD17B11	Q8NBQ5	300 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ADPRHL1	Q8NDY3	354 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR5T1	Q8NG75	326 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR10H5	Q8NGA6	315 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR8J2	Q8NGG1	315 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR52I1	Q8NGK6	324 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR9A4	Q8NGU2	314 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR4K15	Q8NH41	348 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR5W2	Q8NH69	310 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	HAVCR2	Q8TDQ0	301 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SMIM4	Q8WVI0	70 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	KCTD13	Q8WZ19	329 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLAMF9	Q96A28	289 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CXorf40B	Q96DE9	158 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CCDC140	Q96MF4	163 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MS4A4E	Q96PG1	132 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	NPY6R	Q99463	290 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	BARD1	Q99728	777 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CDC6	Q99741	560 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ADAM2	Q99965	735 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	C19orf43	Q9BQ61	176 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	WDR77	Q9BQA1	342 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZPBP	Q9BS86	351 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	NTMT1	Q9BV86	223 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SORBS1	Q9BX66	1292 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	TSSK6	Q9BXA6	273 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	RAB6C	Q9H0N0	254 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC25A51	Q9H1U9	297 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MTIF3	Q9H2K0	278 aa	Known RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GAL3ST2	Q9H3Q3	398 aa		4.34	□□□□□ -1.71

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