RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SLC25A39Q9BZJ4 359 aaPredicted RBP2.15□□□□□ -2.07
TARDBP-208ENST00000477447 RBKSQ9H477 322 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 RMND5AQ9H871 391 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 FOLH1BQ9HBA9 442 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 UFSP2Q9NUQ7 469 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 CGNQ9P2M7 1197 aaKnown RBP2.15□□□□□ -2.07
TARDBP-208ENST00000477447 PRPF19Q9UMS4 504 aaKnown RBP2.15□□□□□ -2.07
TARDBP-208ENST00000477447 MEMO1Q9Y316 297 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 TIMM10BQ9Y5J6 103 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 SH3TC1Q8TE82 1336 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 KIF16BQ96L93 1317 aa2.15□□□□□ -2.07
TARDBP-208ENST00000477447 PLEKHH1Q9ULM0 1364 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 METTL21EPA6NDL7 271 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 IDSB3KWA1 339 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 E9PBE3 544 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 PRRG1O14668 218 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 FAM189A1O60320 539 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 UGT1A9O60656 530 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 DIRAS1O95057 198 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 IGHG4P01861 327 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 OPN1MWP04001 364 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 PTMAP06454 111 aaKnown RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 GIPP09681 153 aaPredicted RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 OPN1MW2P0DN77 364 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 OPN1MW3P0DN78 364 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 RCC1P18754 421 aaPredicted RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 NPR2P20594 1047 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 HNF1AP20823 631 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 HMGB2P26583 209 aaKnown RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 RFC4P35249 363 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 MAP3K8P41279 467 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 VDAC2P45880 294 aaPredicted RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 RPS10P46783 165 aaKnown RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 KPNA2P52292 529 aaKnown RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 C1orf61Q13536 156 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 EIF4EBP2Q13542 120 aaPredicted RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 GANABQ14697 944 aaKnown RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 SLC15A2Q16348 729 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 NRF1Q16656 503 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 KRTAP13-3Q3SY46 172 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 BCL7AQ4VC05 210 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 CASC10Q5T4H9 136 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 OR2G6Q5TZ20 316 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 C11orf71Q6IPW1 123 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 Q6P435 159 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 C6orf89Q6UWU4 347 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 TMIGD1Q6UXZ0 262 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 Q6ZN92 141 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 ACP7Q6ZNF0 438 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 PGAP1Q75T13 922 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 SLC26A11Q86WA9 606 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 RALGPS2Q86X27 583 aaPredicted RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 CCDC50Q8IVM0 306 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 CCDC65Q8IXS2 484 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 C6orf223Q8N319 242 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 Q8N9L7 120 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 OR10G3Q8NGC4 313 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 OR4K14Q8NGD5 310 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 BLOC1S5Q8TDH9 187 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 MAIP1Q8WWC4 291 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 ARPC1AQ92747 370 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 FAM104AQ969W3 186 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 PAGE5Q96GU1 130 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 P2RY13Q9BPV8 354 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 SUDS3Q9H7L9 328 aaPredicted RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 SMPD3Q9NY59 655 aaPredicted RBP2.14□□□□□ -2.07
TARDBP-208ENST00000477447 PIPOXQ9P0Z9 390 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 WSB1Q9Y6I7 421 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
TARDBP-208ENST00000477447 TRBV6-6A0A0A6YYG2 114 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 POLR2DO15514 142 aaKnown RBP2.13□□□□□ -2.07
TARDBP-208ENST00000477447 TNFSF13O75888 250 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ATP5LO75964 103 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 AP2A1O95782 977 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 MOSP00540 346 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 MMP1P03956 469 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 CHTF8P0CG12 524 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF853P0CG23 659 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 HSMCR30P0CW71 290 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 TOP1P11387 765 aaKnown RBP2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ICAM2P13598 275 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 CCDC130P13994 396 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF32P17041 273 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 OTX2P32243 289 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF763Q0D2J5 394 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ASPHQ12797 758 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 PARP15Q460N3 678 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 AGBL2Q5U5Z8 902 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 OR52E8Q6IFG1 317 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 HSDL2Q6YN16 418 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 GET4Q7L5D6 327 aaPredicted RBP2.13□□□□□ -2.07
TARDBP-208ENST00000477447 PRSS41Q7RTY9 318 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF429Q86V71 674 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 OR6C4Q8NGE1 309 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 OR2M2Q96R28 347 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 SECISBP2Q96T21 854 aaKnown RBP2.13□□□□□ -2.07
TARDBP-208ENST00000477447 RNF2Q99496 336 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 NRIP2Q9BQI9 281 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 CHRDL1Q9BU40 450 aa2.13□□□□□ -2.07
TARDBP-208ENST00000477447 ROGDIQ9GZN7 287 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms