RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CA8P35219 290 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 PRKXP51817 358 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 RIPK4P57078 832 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 TIMM10P62072 90 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 KLHL30Q0D2K2 578 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 IL17AQ16552 155 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 GGTA1PQ4G0N0 100 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 FAM71F2Q6NXP2 309 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 KCNIP4Q6PIL6 250 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 FAM220AQ7Z4H9 259 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 ZDHHC21Q8IVQ6 265 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 CLDN19Q8N6F1 224 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 OR10A7Q8NGE5 316 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 DCUN1D4Q92564 292 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 THRSPQ92748 146 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 SYAP1Q96A49 352 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-211ENST00000476215 DTNBP1Q96EV8 351 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 ELOVL3Q9HB03 270 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 RPS6KB2Q9UBS0 482 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 LCMT1Q9UIC8 334 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 CAMTA1Q9Y6Y1 1673 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 TRPM3Q9HCF6 1732 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-211ENST00000476215 MARF1Q9Y4F3 1742 aaKnown RBP3.38□□□□□ -1.87
PTCD3-211ENST00000476215 TTC21AQ8NDW8 1320 aa3.38□□□□□ -1.87
PTCD3-211ENST00000476215 ROCK2O75116 1388 aaKnown RBP3.38□□□□□ -1.87
PTCD3-211ENST00000476215 KTN1Q86UP2 1357 aaKnown RBP3.38□□□□□ -1.87
PTCD3-211ENST00000476215 ALS2Q96Q42 1657 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.37□□□□□ -1.87
PTCD3-211ENST00000476215 NWD2Q9ULI1 1742 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 A0A0J9YXY3 114 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 E7ESA3 106 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 NPIPA7E9PJI5 369 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 ABCD4O14678 606 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 TPST2O60704 377 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 ECI2O75521 394 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 BBOX1O75936 387 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 GUCA1CO95843 209 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 PTMAP06454 111 aaKnown RBP3.37□□□□□ -1.87
PTCD3-211ENST00000476215 NPIPA8P0DM63 369 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 PAX7P23759 505 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 UGT1A5P35504 534 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 PLK1P53350 603 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 ELP6Q0PNE2 266 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 CCDC173Q0VFZ6 552 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 PSG7Q13046 419 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 SNTB2Q13425 540 aaKnown RBP3.37□□□□□ -1.87
PTCD3-211ENST00000476215 SELPLGQ14242 412 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 CCDC14Q49A88 953 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 NADK2Q4G0N4 442 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 CCDC137Q6PK04 289 aaKnown RBP3.37□□□□□ -1.87
PTCD3-211ENST00000476215 UNQ9370/PRO34162Q6UXP9 181 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 SYT10Q6XYQ8 523 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 DHRSXQ8N5I4 330 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 ATP6V0D2Q8N8Y2 350 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 OR52I1Q8NGK6 324 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 TCTEX1D2Q8WW35 142 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 CTNNBL1Q8WYA6 563 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-211ENST00000476215 FAM3CQ92520 227 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 EBF4Q9BQW3 602 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 SPATA16Q9BXB7 569 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 NARFLQ9H6Q4 476 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 SH3BGRL2Q9UJC5 107 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 NAP1L2Q9ULW6 460 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-211ENST00000476215 NPIPA1Q9UND3 350 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 COL14A1Q05707 1796 aaKnown RBP3.37□□□□□ -1.87
PTCD3-211ENST00000476215 BRWD3Q6RI45 1802 aa3.37□□□□□ -1.87
PTCD3-211ENST00000476215 CPSF1Q10570 1443 aaKnown RBP3.36□□□□□ -1.87
PTCD3-211ENST00000476215 VSTM2BA6NLU5 285 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 XPO1O14980 1071 aaKnown RBP3.36□□□□□ -1.87
PTCD3-211ENST00000476215 ADCY5O95622 1261 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 KRT8P05787 483 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 HPNP05981 417 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 ALOX5P09917 674 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 UQCRC2P22695 453 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 SOX6P35712 828 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 CHI3L1P36222 383 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-211ENST00000476215 LEPP41159 167 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 TLE4Q04727 773 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 SYPL1Q16563 259 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 PDK4Q16654 411 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 TRIM16LQ309B1 348 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 PYHIN1Q6K0P9 492 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 GET4Q7L5D6 327 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-211ENST00000476215 MOB3BQ86TA1 216 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 VRK2Q86Y07 508 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 SLC38A6Q8IZM9 456 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 C7orf33Q8WU49 177 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 OR1E3Q8WZA6 343 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 RAPGEF5Q92565 580 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 PGLYRP4Q96LB8 373 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 OMDQ99983 421 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 GAL3ST1Q99999 423 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 ALG12Q9BV10 488 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 EDEM2Q9BV94 578 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 MAGT1Q9H0U3 335 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 RHBGQ9H310 441 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 ZDHHC11Q9H8X9 412 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 ARHGEF28Q8N1W1 1705 aaKnown RBP3.36□□□□□ -1.87
PTCD3-211ENST00000476215 DISP2A7MBM2 1401 aa3.36□□□□□ -1.87
PTCD3-211ENST00000476215 CRB1P82279 1406 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms