RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 NUP37Q8NFH4 326 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 MIPOL1Q8TD10 442 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.8□□□□□ -1.8
PRKD3-208ENST00000475912 C8orf44Q96CB5 159 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 NKX3-1Q99801 234 aaPredicted RBP3.8□□□□□ -1.8
PRKD3-208ENST00000475912 CRACR2AQ9BSW2 395 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 MMADHCQ9H3L0 296 aaPredicted RBP3.8□□□□□ -1.8
PRKD3-208ENST00000475912 KIR3DX1Q9H7L2 352 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 SYTL2Q9HCH5 934 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 KCNJ16Q9NPI9 418 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 IMP3Q9NV31 184 aaKnown RBP3.8□□□□□ -1.8
PRKD3-208ENST00000475912 CTSFQ9UBX1 484 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 C19orf25Q9UFG5 118 aaPredicted RBP3.8□□□□□ -1.8
PRKD3-208ENST00000475912 DOCK10Q96BY6 2186 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 RYR3Q15413 4870 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 SONP18583 2426 aaKnown RBP3.8□□□□□ -1.8
PRKD3-208ENST00000475912 KMT2CQ8NEZ4 4911 aaKnown RBP3.8□□□□□ -1.8
PRKD3-208ENST00000475912 NBEAL2Q6ZNJ1 2754 aa3.8□□□□□ -1.8
PRKD3-208ENST00000475912 SPTBP11277 2137 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 C1orf232A0A0U1RR37 186 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 GSAPA4D1B5 854 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 PHF1O43189 567 aaPredicted RBP3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CDK14O94921 469 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 SERPINA7P05543 415 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 COX6A1P12074 109 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CYP11B1P15538 503 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 EPORP19235 508 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 HLA-DPA1P20036 260 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 NDUFA8P51970 172 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 XGP55808 180 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 TMEM50BP56557 158 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 TPI1P60174 286 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 LRRC63Q05C16 580 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 RIGQ13278 110 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 EFTUD2Q15029 972 aaKnown RBP eCLIP3.79□□□□□ -1.8
PRKD3-208ENST00000475912 SYCP1Q15431 976 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 RBBP7Q16576 425 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CCDC40Q4G0X9 1142 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 SCYL2Q6P3W7 929 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CASC4Q6P4E1 433 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 ARSKQ6UWY0 536 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 BTNL8Q6UX41 500 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 NHLRC1Q6VVB1 395 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 TRAPPC5Q8IUR0 188 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 TUSC5Q8IXB3 177 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CLYBLQ8N0X4 340 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 GPR26Q8NDV2 337 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 MDS2Q8NDY4 140 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 LPCAT1Q8NF37 534 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 OR4E2Q8NGC2 313 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 OR2L2Q8NH16 312 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CCDC110Q8TBZ0 833 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 GLYATL1Q969I3 302 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CCDC47Q96A33 483 aaKnown RBP3.79□□□□□ -1.8
PRKD3-208ENST00000475912 PYCR2Q96C36 320 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 ZNF396Q96N95 335 aaPredicted RBP3.79□□□□□ -1.8
PRKD3-208ENST00000475912 SIGLEC12Q96PQ1 595 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 LYSMD1Q96S90 227 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 TSG101Q99816 390 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 SPATA16Q9BXB7 569 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 RAB11FIP5Q9BXF6 653 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 TDRD1Q9BXT4 1180 aaKnown RBP3.79□□□□□ -1.8
PRKD3-208ENST00000475912 SLC26A1Q9H2B4 701 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 PLEKHF2Q9H8W4 249 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 MED20Q9H944 212 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 WDR54Q9H977 334 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 MRM3Q9HC36 420 aaKnown RBP3.79□□□□□ -1.8
PRKD3-208ENST00000475912 MAN1B1Q9UKM7 699 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 CHKBQ9Y259 395 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 AP1M2Q9Y6Q5 423 aa3.79□□□□□ -1.8
PRKD3-208ENST00000475912 NSG1A0A0A6YYJ2 146 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 A0A1W2PPR1 153 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 VSTM2BA6NLU5 285 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 SNURFLB1AK76 121 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 SLC33A1O00400 549 aaPredicted RBP3.78□□□□□ -1.8
PRKD3-208ENST00000475912 POP7O75817 140 aaKnown RBP3.78□□□□□ -1.8
PRKD3-208ENST00000475912 GOSR1O95249 250 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 CMA1P23946 247 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 PBLDP30039 288 aaPredicted RBP3.78□□□□□ -1.8
PRKD3-208ENST00000475912 HSPA9P38646 679 aaKnown RBP3.78□□□□□ -1.8
PRKD3-208ENST00000475912 NSG1P42857 185 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 SYKP43405 635 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 CDX1P47902 265 aaPredicted RBP3.78□□□□□ -1.8
PRKD3-208ENST00000475912 STX17P56962 302 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 NUP107P57740 925 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 PAX8Q06710 450 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 ZNF33BQ06732 778 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 C17orf67Q0P5P2 114 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 XRCC4Q13426 336 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 EXT1Q16394 746 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 TFDP3Q5H9I0 405 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 ZNF658Q5TYW1 1059 aaPredicted RBP3.78□□□□□ -1.8
PRKD3-208ENST00000475912 OR4A47Q6IF82 309 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 PODNL1Q6PEZ8 512 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 AMZ2Q86W34 360 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 AMIGO1Q86WK6 493 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 PRSS58Q8IYP2 241 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 FAM71AQ8IYT1 594 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 NDUFAF2Q8N183 169 aa3.78□□□□□ -1.8
PRKD3-208ENST00000475912 TRAM1L1Q8N609 369 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms