RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 SLC47A1Q96FL8 570 aa12.88□□□□□ -0.35
ABCF3-211ENST00000475728 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
ABCF3-211ENST00000475728 CSMD1Q96PZ7 3565 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 IGHV3-15A0A0B4J1V0 119 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 GCM2O75603 506 aaPredicted RBP12.87□□□□□ -0.35
ABCF3-211ENST00000475728 GOSR1O95249 250 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 FAM107AO95990 144 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 OPN1SWP03999 348 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 POU2F1P14859 743 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 NRF1Q16656 503 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 DUSP7Q16829 419 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 ALG10BQ5I7T1 473 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 C1orf140Q5VVS0 124 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 ABLIM2Q6H8Q1 611 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 PAQR6Q6TCH4 344 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 GALNT5Q7Z7M9 940 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 MED12LQ86YW9 2145 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 SLC15A3Q8IY34 581 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 ZNF295-AS1Q8N0V1 137 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 ZNF610Q8N9Z0 462 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 TAMM41Q96BW9 452 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 CCT8L2Q96SF2 557 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 ARHGDIGQ99819 225 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 PSD2Q9BQI7 771 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 CMTM6Q9NX76 183 aa12.87□□□□□ -0.35
ABCF3-211ENST00000475728 IGKV3D-15A0A087WSY6 115 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 ZC3H12DA2A288 527 aaKnown RBP12.86□□□□□ -0.35
ABCF3-211ENST00000475728 LIPT2A6NK58 231 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 CCT8L1PA6NM43 557 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 C16orf97H3BN30 126 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 OR2T1O43869 369 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 EPXP11678 715 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 IMPDH2P12268 514 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 CD247P20963 164 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 FPR1P21462 350 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 HTR2AP28223 471 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 GTF2E2P29084 291 aaKnown RBP12.86□□□□□ -0.35
ABCF3-211ENST00000475728 KDELR2P33947 212 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 MNAT1P51948 309 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 SLC7A2P52569 658 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 SLC16A1P53985 500 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 H3F3AP84243 136 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 TLE4Q04727 773 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 LIPEQ05469 1076 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 OR1Q1Q15612 314 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 ZNF613Q6PF04 617 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 ZNF474Q6S9Z5 364 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-211ENST00000475728 COMTD1Q86VU5 262 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 GPR32P1Q8NGA4 272 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 MFSD8Q8NHS3 518 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 RNF217Q8TC41 542 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 LZICQ8WZA0 190 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 SLC38A4Q969I6 547 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 EPYCQ99645 322 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 MCHR1Q99705 422 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 MCCC2Q9HCC0 563 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 FAM53CQ9NYF3 392 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 CRIM1Q9NZV1 1036 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 HCFC1P51610 2035 aa12.86□□□□□ -0.35
ABCF3-211ENST00000475728 A0A0B4J2E0 115 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 A0A1B0GX12 115 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 M0R3H8 397 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 CASKO14936 926 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 GSTA4O15217 222 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 NPIPB7O75200 414 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 VAMP5O95183 116 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 PPP3CBP16298 524 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 UGT2B10P36537 528 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 PSME3P61289 254 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 FAM27E3Q08E93 113 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 BNIP2Q12982 314 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 CEACAM7Q14002 265 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 MFSD13AQ14CX5 517 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 OR7A5Q15622 319 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 EXOC3L2Q2M3D2 409 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 C8orf82Q6P1X6 216 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-211ENST00000475728 ZNF100Q8IYN0 542 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 CCDC197Q8NCU1 140 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 USB1Q9BQ65 265 aaKnown RBP12.85□□□□□ -0.35
ABCF3-211ENST00000475728 SF3B5Q9BWJ5 86 aaKnown RBP12.85□□□□□ -0.35
ABCF3-211ENST00000475728 HDHD5Q9BXW7 423 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-211ENST00000475728 POLR2J2Q9GZM3 115 aaKnown RBP12.85□□□□□ -0.35
ABCF3-211ENST00000475728 POLR2J3Q9H1A7 115 aaKnown RBP12.85□□□□□ -0.35
ABCF3-211ENST00000475728 ALG2Q9H553 416 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 C12orf49Q9H741 205 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 SPAG4Q9NPE6 437 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 PARPBPQ9NWS1 579 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 ADPRHL2Q9NX46 363 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 TAGLN3Q9UI15 199 aa12.85□□□□□ -0.35
ABCF3-211ENST00000475728 TRAV36DV7A0A075B6V5 113 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 A0A087WUJ7 227 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 SH3D21A4FU49 640 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 AQP7P3A6NL99 342 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 NME4O00746 187 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms