RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TMEM72A0PK05 275 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 OR7A17O14581 309 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 PTTG1O95997 202 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 FCGR2AP12318 317 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 HTD2P86397 168 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 MRPL41Q8IXM3 137 aaKnown RBP10.21□□□□□ -0.77
VAPB-204ENST00000475243 MFFQ9GZY8 342 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 ZNF223Q9UK11 482 aaPredicted RBP10.21□□□□□ -0.77
VAPB-204ENST00000475243 HLA-AP01891 365 aaKnown RBP10.21□□□□□ -0.77
VAPB-204ENST00000475243 MANEAQ5SRI9 462 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 SLC7A5P1Q8MH63 180 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 FAM160A2Q8N612 972 aaPredicted RBP10.21□□□□□ -0.77
VAPB-204ENST00000475243 DMBX1Q8NFW5 382 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 GTF2H4Q92759 462 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 TIMM29Q9BSF4 260 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 TUBG2Q9NRH3 451 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 NDUFAF4Q9P032 175 aa10.21□□□□□ -0.77
VAPB-204ENST00000475243 CENPBD1B2RD01 187 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 DPM1O60762 260 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 MMP2P08253 660 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 MRPS21P82921 87 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 MZT1Q08AG7 82 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 PAN3Q58A45 887 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 CST9LP1Q5W188 147 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 TBPL2Q6SJ96 375 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 CLEC14AQ86T13 490 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 RBM12BQ8IXT5 1001 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 RNF128Q8TEB7 428 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 NAT6Q93015 286 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 CMSS1Q9BQ75 279 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 TRAPPC2LQ9UL33 140 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 A0A1W2PPV4 95 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 FOXE1O00358 373 aaPredicted RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 NUPL2O15504 423 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 DCDP81605 110 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 RBPJQ06330 500 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 HEPHL1Q6MZM0 1159 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 OR7G2Q8NG99 324 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 SLC41A2Q96JW4 573 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 SLC6A18Q96N87 628 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 ATOH8Q96SQ7 321 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 UNKLQ9H9P5 680 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 NOSIPQ9Y314 301 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 ACOD1A6NK06 481 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 POM121CA8CG34 1229 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 GLSO94925 669 aaPredicted RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 ATXN1LP0C7T5 689 aaKnown RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 ZNF705DP0CH99 300 aaPredicted RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 ZNF705BP0CI00 300 aaPredicted RBP10.21□□□□□ -0.78
VAPB-204ENST00000475243 OMGP23515 440 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 OR1D5P58170 312 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 TNK1Q13470 666 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 VRK3Q8IV63 474 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 SLC38A5Q8WUX1 472 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 WWTR1Q9GZV5 400 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 CXCL16Q9H2A7 254 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 C1orf198Q9H425 327 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 NOX3Q9HBY0 568 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 ADAMTS5Q9UNA0 930 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 CRYBG1Q9Y4K1 1723 aa10.21□□□□□ -0.78
VAPB-204ENST00000475243 GABRPO00591 440 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 RFPL3O75679 317 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ESPNLQ6ZVH7 1005 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 OR4M1Q8NGD0 313 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 PHOSPHO2Q8TCD6 241 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 CRYGNQ8WXF5 182 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 MICU1Q9BPX6 476 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 UTP23Q9BRU9 249 aaKnown RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 PRR14Q9BWN1 585 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 C12orf49Q9H741 205 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TMEM45AQ9NWC5 275 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 FBXO24O75426 580 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ZIC2O95409 532 aaPredicted RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 B3GALT4O96024 378 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 DHRS4L1P0CG22 281 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 GM2AP17900 193 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TACR3P29371 465 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 SSTP61278 116 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 BATF2Q8N1L9 274 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 BRIX1Q8TDN6 353 aaKnown RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 PRRT1Q99946 306 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 CSNK1G1Q9HCP0 422 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 HEMK1Q9Y5R4 338 aaPredicted RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 USP3Q9Y6I4 520 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 FZD7O75084 574 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TNFRSF17Q02223 184 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ESCO2Q56NI9 601 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 OR5M1Q8NGP8 315 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 MIB2Q96AX9 1013 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 SLC38A1Q9H2H9 487 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 KCNJ16Q9NPI9 418 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 BABAM2Q9NXR7 383 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 SLC23A2Q9UGH3 650 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 PHIPQ8WWQ0 1821 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 C1orf196B1AJZ1 125 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 SURF4O15260 269 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 PCBD1P61457 104 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms