RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 E9PLN8 166 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 PRRG2O14669 202 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF208O43345 1280 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 CXCL13O43927 109 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 RAMP1O60894 148 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 FZD7O75084 574 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 DIRAS1O95057 198 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ENPP1P22413 925 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 MAGEA2P43356 314 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 YAP1P46937 504 aaKnown RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ERFP50548 548 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 P2RY4P51582 365 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 NUP107P57740 925 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 H3F3AP84243 136 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 GABPB1Q06547 395 aaPredicted RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 TRAP1Q12931 704 aaKnown RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 SELENBP1Q13228 472 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 GUSBP1Q15486 140 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 IFI44LQ53G44 452 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 SYT14P1Q58G82 188 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ALG10BQ5I7T1 473 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 C1orf185Q5T7R7 199 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 WLSQ5T9L3 541 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 NSUN5P2Q63ZY6 315 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF613Q6PF04 617 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ULK3Q6PHR2 472 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 TMPPEQ6ZT21 453 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 CCDC121Q6ZUS5 278 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ESPNLQ6ZVH7 1005 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 DHFR2Q86XF0 187 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 NKAIN4Q8IVV8 208 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ADGRG5Q8IZF4 528 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 C9orf106Q8NAJ2 232 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 OR2V1Q8NHB1 315 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 FNDC9Q8TBE3 224 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 DNAJA4Q8WW22 397 aaPredicted RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 RASSF5Q8WWW0 418 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 GEMIN6Q8WXD5 167 aaKnown RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 OSTF1Q92882 214 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 TAAR8Q969N4 342 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 SLCO4A1Q96BD0 722 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 KTI12Q96EK9 354 aaPredicted RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 PYURFQ96I23 114 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 KLHL15Q96M94 604 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 VKORC1Q9BQB6 163 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 TTYH2Q9BSA4 534 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 FUZQ9BT04 418 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 TP63Q9H3D4 680 aaPredicted RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 MUC13Q9H3R2 512 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 C12orf10Q9HB07 376 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 CACYBPQ9HB71 228 aaKnown RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 CHST11Q9NPF2 352 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 MEPEQ9NQ76 525 aaPredicted RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ADPRHL2Q9NX46 363 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 KLHL28Q9NXS3 571 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ALKBH4Q9NXW9 302 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 RHCGQ9UBD6 479 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 RIMS3Q9UJD0 308 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 SLC13A4Q9UKG4 626 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 PRDM4Q9UKN5 801 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 SLC9A8Q9Y2E8 581 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ENPP4Q9Y6X5 453 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF469Q96JG9 3925 aaPredicted RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 A0A0G2JNJ9 132 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 TCRBV3S1A0A5B6 114 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 TRAPPC13A5PLN9 417 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 MBD3L4A6NDZ8 208 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 MBD3L3A6NE82 208 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 MBD3L5A6NJ08 208 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 LIPT2A6NK58 231 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 LRRN3E7EW58 273 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 H0Y3Z8 333 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 hCG_2039718K7EN88 272 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CCL21O00585 134 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SMAD9O15198 467 aaKnown RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 WDR1O75083 606 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 OR5F1O95221 314 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 MT-ND1P03886 318 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 IFNW1P05000 195 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 UQCRBP14927 111 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CXCR1P25024 350 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CEACAM8P31997 349 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 NTF4P34130 210 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 HTR3AP46098 478 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 EIF1AXP47813 144 aaKnown RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 DIO1P49895 249 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 AGFG1P52594 562 aaKnown RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 COPZ1P61923 177 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 TLE4Q04727 773 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 RBPJQ06330 500 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 PMPCAQ10713 525 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 FOXF2Q12947 444 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 FOXD4Q12950 439 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-204ENST00000474665 CCNIQ14094 377 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 PON3Q15166 354 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SEC23BQ15437 767 aa6.24□□□□□ -1.41
LIMD1-204ENST00000474665 SWT1Q5T5J6 900 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms