RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 RPS15AP62244 130 aaKnown RBP2.23□□□□□ -2.05
XRN1-210ENST00000472697 IL18Q14116 193 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 SSX2Q16385 188 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 RNLSQ5VYX0 342 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 TRNP1Q6NT89 227 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 RHBDD2Q6NTF9 364 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 TMEM184AQ6ZMB5 413 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 Q6ZSR9 355 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 NLRP9Q7RTR0 991 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 SLC35F2Q8IXU6 374 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 CMTM1Q8IZ96 169 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 B3GNT7Q8NFL0 401 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 TCP10LQ8TDR4 215 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 ADAMTS16Q8TE57 1224 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 DYRK2Q92630 601 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 DLX4Q92988 240 aaPredicted RBP2.23□□□□□ -2.05
XRN1-210ENST00000472697 DUS3LQ96G46 650 aaKnown RBP2.23□□□□□ -2.05
XRN1-210ENST00000472697 CELF6Q96J87 481 aaKnown RBP2.23□□□□□ -2.05
XRN1-210ENST00000472697 RCHY1Q96PM5 261 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 KCNA7Q96RP8 456 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 PKIBQ9C010 78 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 AUNIPQ9H7T9 357 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 NT5DC2Q9H857 520 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 MRPL22Q9NWU5 206 aaKnown RBP2.23□□□□□ -2.05
XRN1-210ENST00000472697 MYEF2Q9P2K5 600 aaKnown RBP2.23□□□□□ -2.05
XRN1-210ENST00000472697 SLC2A6Q9UGQ3 507 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 STAP1Q9ULZ2 295 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 EXOGQ9Y2C4 368 aaKnown RBP2.23□□□□□ -2.05
XRN1-210ENST00000472697 KCNIP3Q9Y2W7 256 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 MMP24Q9Y5R2 645 aa2.23□□□□□ -2.05
XRN1-210ENST00000472697 COL3A1P02461 1466 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 LTBP2Q14767 1821 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 SIPA1L3O60292 1781 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 IGKV1D-8A0A087WSZ0 117 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 FAM240BA0A1B0GVZ2 78 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 CLEC18AA5D8T8 446 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 ZNF840PA6NDX5 716 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 RNF212BA8MTL3 300 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 CLOCKO15516 846 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 LRATO95237 230 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TOMM40O96008 361 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PEX11BO96011 259 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 IGHV4-38-2P0DP08 117 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TNNI1P19237 187 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 ATP5A1P25705 553 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 U2AF2P26368 475 aaKnown RBP eCLIP2.22□□□□□ -2.052e-8■□□□□ 10.6
XRN1-210ENST00000472697 LONP1P36776 959 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 PGFP49763 221 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 DVL1P1P54792 670 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 CDH4P55283 916 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TNNC1P63316 161 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 SRSF1Q07955 248 aaKnown RBP eCLIP2.22□□□□□ -2.05
XRN1-210ENST00000472697 SRSF4Q08170 494 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 TRIP6Q15654 476 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 CD226Q15762 336 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 HLFQ16534 295 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 MTHFSDQ2M296 383 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 ASPRV1Q53RT3 343 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GPR157Q5UAW9 335 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 CWC27Q6UX04 472 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 VTCN1Q7Z7D3 282 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 MOB3BQ86TA1 216 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TRAM1L1Q8N609 369 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 Q8N9G6 341 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 CLEC18CQ8NCF0 446 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 OR56A4Q8NGH8 313 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 LNX1Q8TBB1 728 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 PLPPR1Q8TBJ4 325 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PAQR8Q8TEZ7 354 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TSEN15Q8WW01 171 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 APH1AQ96BI3 265 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PINX1Q96BK5 328 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 PLEKHA8Q96JA3 519 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 CPXM1Q96SM3 734 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 TM2D1Q9BX74 207 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 STMN4Q9H169 189 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 NXF3Q9H4D5 531 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 RNF41Q9H4P4 317 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 MTHFD2LQ9H903 347 aaPredicted RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 CHRAC1Q9NRG0 131 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PNO1Q9NRX1 252 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 IL36RNQ9UBH0 155 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PRODH2Q9UF12 536 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PURGQ9UJV8 347 aaKnown RBP2.22□□□□□ -2.05
XRN1-210ENST00000472697 ZNF229Q9UJW7 825 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 STARD10Q9Y365 291 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 INSL6Q9Y581 213 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 NPTNQ9Y639 398 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 A0A0G2JLM5 398 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 K7EN84 100 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PSMD11O00231 422 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 FCN3O75636 299 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GAGE7O76087 117 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GAGE12FP0CL80 117 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GAGE12GP0CL81 117 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GAGE12IP0CL82 117 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 FGF5P12034 268 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 ZNF43P17038 809 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 GIFP27352 417 aa2.22□□□□□ -2.05
XRN1-210ENST00000472697 PLTPP55058 493 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms