RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 CENPPQ6IPU0 288 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 ZSCAN25Q6NSZ9 544 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 CASC1Q6TDU7 716 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 RGS9BPQ6ZS82 235 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 PRSS41Q7RTY9 318 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 ZNF679Q8IYX0 411 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 C6orf223Q8N319 242 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 ZCCHC7Q8N3Z6 543 aaKnown RBP2.6□□□□□ -1.99
PTCD3-209ENST00000472044 FTMTQ8N4E7 242 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 Q8N7P7 452 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 LINC01555Q8NAE3 123 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 OR10G3Q8NGC4 313 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 OR5D13Q8NGL4 314 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 NEIL3Q8TAT5 605 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 PAGE5Q96GU1 130 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 RBM14Q96PK6 669 aaKnown RBP2.6□□□□□ -1.99
PTCD3-209ENST00000472044 CAPS2Q9BXY5 557 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 C20orf85Q9H1P6 137 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 VCX2Q9H322 139 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 ASB8Q9H765 288 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 YY1AP1Q9H869 796 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 NHEJ1Q9H9Q4 299 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-209ENST00000472044 ABCB10Q9NRK6 738 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 TREM2Q9NZC2 230 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 CDH9Q9ULB4 789 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 V9GY05 133 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 WI2-2373I1.2A0A1W2PRP0 233 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 PCP4L1A6NKN8 68 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 KRTAP4-16G5E9R7 235 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-209ENST00000472044 PANO1I0J062 215 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 GFYI3L273 518 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 NBR2O15453 112 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 POLR2DO15514 142 aaKnown RBP2.59□□□□□ -1.99
PTCD3-209ENST00000472044 UGT1A9O60656 530 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 RBMY1CP0DJD4 496 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 CCDC130P13994 396 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 COX7A1P24310 79 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 HTR1FP30939 366 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 DRD3P35462 400 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 KLK7P49862 253 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 KPNA2P52292 529 aaKnown RBP2.59□□□□□ -1.99
PTCD3-209ENST00000472044 PKNOX1P55347 436 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 NUP107P57740 925 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 FGL1Q08830 312 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 PARP15Q460N3 678 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 C1orf100Q5SVJ3 147 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 OR2G6Q5TZ20 316 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 RDH10Q8IZV5 341 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 SCFD1Q8WVM8 642 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 ELSPBP1Q96BH3 223 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 TM4SF19Q96DZ7 209 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 SLC38A2Q96QD8 506 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 MTMR9Q96QG7 549 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 NPAS2Q99743 824 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 POLR2J2Q9GZM3 115 aaKnown RBP2.59□□□□□ -1.99
PTCD3-209ENST00000472044 POLR2J3Q9H1A7 115 aaKnown RBP2.59□□□□□ -1.99
PTCD3-209ENST00000472044 NARFLQ9H6Q4 476 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 SLC25A22Q9H936 323 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 LRRC40Q9H9A6 602 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 AIG1Q9NVV5 245 aa2.59□□□□□ -1.99
PTCD3-209ENST00000472044 RPL36Q9Y3U8 105 aaKnown RBP2.59□□□□□ -1.99
PTCD3-209ENST00000472044 USP27XA6NNY8 438 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 A8MUA0 341 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 LOC110117498-PIK3R3F6TDL0 507 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 CXCL11O14625 94 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 ABCD4O14678 606 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 ZNF208O43345 1280 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 ZNF861PO60384 105 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 ATP5LO75964 103 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 DIRAS1O95057 198 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 PCMT1P22061 227 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 HTR1EP28566 365 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 CD1BP29016 333 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 GNA11P29992 359 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 PRDX3P30048 256 aaKnown RBP2.58□□□□□ -2
PTCD3-209ENST00000472044 CCR1P32246 355 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 SHMT2P34897 504 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 HLCSP50747 726 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 AIF1P55008 147 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 DAZ2Q13117 558 aaKnown RBP2.58□□□□□ -2
PTCD3-209ENST00000472044 OXA1LQ15070 435 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 DUSP7Q16829 419 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 MICBQ29980 383 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 C2orf83Q53S99 150 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 CARD16Q5EG05 197 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 SAMD4BQ5PRF9 694 aaKnown RBP2.58□□□□□ -2
PTCD3-209ENST00000472044 TRIM69Q86WT6 500 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 EIF1ADQ8N9N8 165 aaKnown RBP2.58□□□□□ -2
PTCD3-209ENST00000472044 C20orf203Q8NBC4 194 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 ZNF740Q8NDX6 193 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 BHLHE23Q8NDY6 225 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 OR4K14Q8NGD5 310 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 MAGEE2Q8TD90 523 aaPredicted RBP2.58□□□□□ -2
PTCD3-209ENST00000472044 DCUN1D4Q92564 292 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 UCN3Q969E3 161 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 RPRD1AQ96P16 312 aaPredicted RBP2.58□□□□□ -2
PTCD3-209ENST00000472044 OXGR1Q96P68 337 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 SECISBP2Q96T21 854 aaKnown RBP2.58□□□□□ -2
PTCD3-209ENST00000472044 RNF2Q99496 336 aa2.58□□□□□ -2
PTCD3-209ENST00000472044 P2RY13Q9BPV8 354 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms