RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 MROH6A6NGR9 719 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 TRA2AQ13595 282 aaKnown RBP eCLIP7.97□□□□□ -1.13
CD47-204ENST00000471694 OR1Q1Q15612 314 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 VMACQ2NL98 169 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 CYB561A3Q8NBI2 242 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 NUP37Q8NFH4 326 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 FUBP1Q96AE4 644 aaKnown RBP7.97□□□□□ -1.13
CD47-204ENST00000471694 ZNF395Q9H8N7 513 aaPredicted RBP7.97□□□□□ -1.13
CD47-204ENST00000471694 FETUBQ9UGM5 382 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 OAZ3Q9UMX2 235 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 LTBP4Q8N2S1 1624 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 A0A096LPE4 126 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 A0A1W2PPZ6 126 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 PRAMEF27A3QJZ7 478 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 A8MVM7 634 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 CCNKO75909 580 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 IFNA7P01567 189 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 PRKACBP22694 351 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 CCR7P32248 378 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 ART1P52961 327 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 PLA1AQ53H76 456 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 SLC6A19Q695T7 634 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 PLD6Q8N2A8 252 aaKnown RBP7.97□□□□□ -1.13
CD47-204ENST00000471694 DGCR14Q96DF8 476 aaKnown RBP7.97□□□□□ -1.13
CD47-204ENST00000471694 DHRS4Q9BTZ2 278 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 NRSN2Q9GZP1 204 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 C1orf198Q9H425 327 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 RIMS3Q9UJD0 308 aa7.97□□□□□ -1.13
CD47-204ENST00000471694 UBR2Q8IWV8 1755 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 A0A0U1RQK1 487 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 A0A1B0GV50 99 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 MEIOCA2RUB1 952 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 EME2A4GXA9 379 aaPredicted RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 OR6C70A6NIJ9 312 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 CDK2AP1O14519 115 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 SPRY3O43610 288 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 GJB3O75712 270 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 SLC34A2O95436 690 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 HMGN2P05204 90 aaKnown RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 PIPP12273 146 aaPredicted RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 GNB3P16520 340 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 KITLGP21583 273 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 CD79BP40259 229 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 SRP9P49458 86 aaKnown RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 TATDN3Q17R31 274 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 SBSNQ6UWP8 590 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 VRK2Q86Y07 508 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 LILRA2Q8N149 483 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 PHTF2Q8N3S3 785 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 CADM4Q8NFZ8 388 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 OR5J2Q8NH18 312 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 TINAGL1Q9GZM7 467 aaPredicted RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 CNIH4Q9P003 139 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 IL17CQ9P0M4 197 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 NUP188Q5SRE5 1749 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 OR6C76A6NM76 312 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 SMAD7O15105 426 aaKnown RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 EFSO43281 561 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 PLRG1O43660 514 aaKnown RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 AHCYL1O43865 530 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 JRKO75564 520 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 SEC14L2O76054 403 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 CLDN15P56746 228 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 CLDN8P56748 225 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 PPP2CBP62714 309 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 PPP2CAP67775 309 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 HNRNPA0Q13151 305 aaKnown RBP7.96□□□□□ -1.13
CD47-204ENST00000471694 LEXMQ3ZCV2 418 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 PRAMEF9Q5VWM5 478 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 TMEM205Q6UW68 189 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 C5orf46Q6UWT4 87 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 TMEM139Q8IV31 216 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 MINDY2Q8NBR6 621 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 OR8J3Q8NGG0 315 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 NEIL3Q8TAT5 605 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 ZNF480Q8WV37 535 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 LHPPQ9H008 270 aa7.96□□□□□ -1.13
CD47-204ENST00000471694 TUBAL3A6NHL2 446 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 H7C1Q1 480 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 K7ESM1 405 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 OR7C1O76099 320 aaPredicted RBP7.96□□□□□ -1.14
CD47-204ENST00000471694 GNAO1P09471 354 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 ADRA1AP35348 466 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 PHC1P78364 1004 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 AKR1C1Q04828 323 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 TP53I3Q53FA7 332 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 TMEM244Q5VVB8 128 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 FJX1Q86VR8 437 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 FAM217AQ8IXS0 508 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 METTL4Q8N3J2 472 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 SEMA4GQ9NTN9 838 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 MBD1Q9UIS9 605 aaPredicted RBP7.96□□□□□ -1.14
CD47-204ENST00000471694 LSM5Q9Y4Y9 91 aaKnown RBP7.96□□□□□ -1.14
CD47-204ENST00000471694 TMEM269A0A1B0GVZ9 245 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 POM121BA6NF01 834 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 SERINC4A6NH21 518 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 DEGS1O15121 323 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 SLCO2B1O94956 709 aa7.96□□□□□ -1.14
CD47-204ENST00000471694 ZGLP1P0C6A0 271 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms