RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ZNF140P52738 457 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 MTCP1P56278 107 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 GMFBP60983 142 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 RPS14P62263 151 aaKnown RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CST6Q15828 149 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 C3AR1Q16581 482 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CDKN3Q16667 212 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 KRTAP13-3Q3SY46 172 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 TMEM52BQ4KMG9 183 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 LGSNQ5TDP6 509 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 RNLSQ5VYX0 342 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 NEPROQ6NW34 567 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 NEK5Q6P3R8 708 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CES3Q6UWW8 571 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 TMUB2Q71RG4 321 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 SLC26A11Q86WA9 606 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 LRRC6Q86X45 466 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 RIBC1Q8N443 379 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 OR4K2Q8NGD2 314 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 OR5M9Q8NGP3 310 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 OR4L1Q8NH43 312 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 ST7LQ8TDW4 575 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 FAM131CQ96AQ9 280 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CLDN23Q96B33 292 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CERS2Q96G23 380 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CDKN2AIPNLQ96HQ2 116 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 ZIM3Q96PE6 472 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 RBM24Q9BX46 236 aaKnown RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 MFSD1Q9H3U5 465 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 IARS2Q9NSE4 1012 aaKnown RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 C20orf96Q9NUD7 363 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 ZNF446Q9NWS9 450 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CNIH4Q9P003 139 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 IL17CQ9P0M4 197 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 APPL1Q9UKG1 709 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 NCKAP1Q9Y2A7 1128 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 ARL5AQ9Y689 179 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 TRPM6Q9BX84 2022 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 SH3BGRLO75368 114 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 C1QAP02745 245 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SHBGP04278 402 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SELEP16581 610 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SPRP35270 261 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 DRD3P35462 400 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 P2RY2P41231 377 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 PSMD8P48556 350 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SPINT3P49223 89 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SERPINB9P50453 376 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 STC1P52823 247 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 NDUFV3P56181 108 aaKnown RBP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 HTD2P86397 168 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SIGLEC14Q08ET2 396 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 CNTN1Q12860 1018 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 DNAJC3Q13217 504 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 HSP90B2PQ58FF3 399 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 LRRC73Q5JTD7 316 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 PIP5KL1Q5T9C9 394 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 LYPLAL1Q5VWZ2 237 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 OLFML2AQ68BL7 652 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 LRRC66Q68CR7 880 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 AFTPHQ6ULP2 937 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 CERS6Q6ZMG9 384 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 MACC1Q6ZN28 852 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 MTERF4Q7Z6M4 381 aaKnown RBP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 CNTN4Q8IWV2 1026 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 CTAGE3PQ8IX95 158 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 OR13C4Q8NGS5 318 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SSC4DQ8WTU2 575 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 NXPE2Q96DL1 559 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 BSCL2Q96G97 398 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 VPS39Q96JC1 886 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 DNAJC1Q96KC8 554 aaKnown RBP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 FAM111AQ96PZ2 611 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SMIM14Q96QK8 99 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 OMDQ99983 421 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 STMN4Q9H169 189 aaPredicted RBP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 ZDHHC4Q9NPG8 344 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 IL26Q9NPH9 171 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 MED4Q9NPJ6 270 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 POLE3Q9NRF9 147 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 FBXL12Q9NXK8 326 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 ZNF581Q9P0T4 197 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 SLC2A6Q9UGQ3 507 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 LGALS13Q9UHV8 139 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 AURKCQ9UQB9 309 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 TDRKHQ9Y2W6 561 aaKnown RBP4.21□□□□□ -1.74
CCDC39-202ENST00000471307 FADS3Q9Y5Q0 445 aa4.21□□□□□ -1.74
CCDC39-202ENST00000471307 TRBV5-4A0A0C4DH59 114 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 GLYATL1P3A0A0U1RQE8 302 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 IQANK1A0A1B0GTG1 560 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 CCDC162PA2VCL2 907 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 SLC9B1P1A6NJY1 282 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 A8MX80 341 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 GOLGA8KD6RF30 607 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 RGS16O15492 202 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-202ENST00000471307 TNFSF12O43508 249 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 RAD51DO75771 328 aa4.2□□□□□ -1.74
CCDC39-202ENST00000471307 SRP72O76094 671 aaKnown RBP4.2□□□□□ -1.74
CCDC39-202ENST00000471307 GOT2P00505 430 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms