RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 BRD7Q9NPI1 651 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 EMC3Q9P0I2 261 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 NCDNQ9UBB6 729 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 COPS3Q9UNS2 423 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 TRABD2BA6NFA1 517 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 EFCAB7A8K855 629 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 PIN1P1O15428 100 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.4
BRCA1-209ENST00000470026 ANKRD34CP0C6C1 535 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 PER3P56645 1201 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 YPEL5P62699 121 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 RPS4XP62701 263 aaKnown RBP12.52□□□□□ -0.4
BRCA1-209ENST00000470026 IGLV3-21P80748 117 aaPredicted RBP12.52□□□□□ -0.4
BRCA1-209ENST00000470026 LGALS3BPQ08380 585 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 FAM53BQ14153 422 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 PON3Q15166 354 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 UBE2NLQ5JXB2 153 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 FAM109BQ6ICB4 259 aaPredicted RBP12.52□□□□□ -0.4
BRCA1-209ENST00000470026 TMEM184AQ6ZMB5 413 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 FAM109AQ8N4B1 249 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 OR11H4Q8NGC9 324 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 OR4N2Q8NGD1 307 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 GPBAR1Q8TDU6 330 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 ZNF431Q8TF32 576 aaPredicted RBP12.52□□□□□ -0.4
BRCA1-209ENST00000470026 GPX7Q96SL4 187 aaPredicted RBP12.52□□□□□ -0.4
BRCA1-209ENST00000470026 GFI1Q99684 422 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 GSDMCQ9BYG8 508 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 HEXA-AS1Q9H8Q6 139 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 MKKSQ9NPJ1 570 aaPredicted RBP12.52□□□□□ -0.4
BRCA1-209ENST00000470026 CPNE7Q9UBL6 633 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 NPTNQ9Y639 398 aa12.52□□□□□ -0.4
BRCA1-209ENST00000470026 MEIKINA0A087WXM9 373 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 A0A1B0GVI7 797 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 KLF8O95600 359 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-209ENST00000470026 TPOP07202 933 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 H2AFB2P0C5Z0 115 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 CXCL3P19876 107 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 ZNHIT3Q15649 155 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-209ENST00000470026 FAM199XQ6PEV8 388 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-209ENST00000470026 ZC3H14Q6PJT7 736 aaKnown RBP12.52□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF614Q8N883 585 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 OR56B4Q8NH76 319 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 PHF21AQ96BD5 680 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 OR14A2Q96R54 314 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 LMAN2LQ9H0V9 348 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 CD93Q9NPY3 652 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 UCKL1Q9NWZ5 548 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 MGAT4AQ9UM21 535 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 AK6Q9Y3D8 172 aaKnown RBP12.52□□□□□ -0.41
BRCA1-209ENST00000470026 AUP1Q9Y679 476 aa12.52□□□□□ -0.41
BRCA1-209ENST00000470026 TRBV2A0A0J9YWF9 115 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 A0A1W2PPK0 400 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF593O00488 134 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-209ENST00000470026 GPR171O14626 319 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 HCRTR1O43613 425 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 RDH16O75452 317 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 PPM1BO75688 479 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 IGF2P01344 180 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 WNT1P04628 370 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 NUDT1P36639 197 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 NAA10P41227 235 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-209ENST00000470026 PSMD4P55036 377 aaKnown RBP12.51□□□□□ -0.41
BRCA1-209ENST00000470026 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-209ENST00000470026 ILF3Q12906 894 aaKnown RBP eCLIP12.51□□□□□ -0.41
BRCA1-209ENST00000470026 ST3GAL2Q16842 350 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 NPSR1Q6W5P4 371 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF527Q8NB42 609 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 LGALS14Q8TCE9 139 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 SNX33Q8WV41 574 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 PATE1Q8WXA2 126 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 MRPL48Q96GC5 212 aaKnown RBP12.51□□□□□ -0.41
BRCA1-209ENST00000470026 ZFP3Q96NJ6 502 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 CCDC86Q9H6F5 360 aaKnown RBP12.51□□□□□ -0.41
BRCA1-209ENST00000470026 C2orf42Q9NWW7 574 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 HRASLS2Q9NWW9 162 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 C5orf42Q9H799 3197 aa12.51□□□□□ -0.41
BRCA1-209ENST00000470026 LINC00862A6NCI5 91 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 SYNDIG1LA6NDD5 238 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 OR6C68A6NDL8 312 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF879B4DU55 563 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 TGFBR3LH3BV60 316 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 OR10H2O60403 315 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 SPI1P17947 270 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 SRMP19623 302 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 EDNRAP25101 427 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 DPP4P27487 766 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 GDNFP39905 211 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 CCR6P51684 374 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 SNTB2Q13425 540 aaKnown RBP12.5□□□□□ -0.41
BRCA1-209ENST00000470026 CAMK2DQ13557 499 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 ESCO2Q56NI9 601 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 FAM69AQ5T7M9 428 aa12.5□□□□□ -0.41
BRCA1-209ENST00000470026 LINC01590Q5TEZ4 76 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms