RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MAD2L1Q13257 205 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-204ENST00000469207 CEACAM7Q14002 265 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 CASP8Q14790 479 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 CHI3L2Q15782 390 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 COX20Q5RI15 118 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 TUBA1AQ71U36 451 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 SSX8Q7RTT4 187 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 RNF130Q86XS8 419 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 PNPT1Q8TCS8 783 aaKnown RBP10.71□□□□□ -0.69
HDAC3-204ENST00000469207 PROX1Q92786 737 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 NEURL3Q96EH8 262 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 SLC35A5Q9BS91 424 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 SOX7Q9BT81 388 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 SHARPINQ9H0F6 387 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 SLC38A1Q9H2H9 487 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 RLIMQ9NVW2 624 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 LGALS13Q9UHV8 139 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 PMF1-BGLAPU3KQ54 211 aa10.71□□□□□ -0.69
HDAC3-204ENST00000469207 ARFGEF3Q5TH69 2177 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 IGHV1-18A0A0C4DH31 117 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 IGHV4-61A0A0C4DH41 118 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 VWC2LB2RUY7 222 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 NUDT17P0C025 328 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 IL12AP29459 219 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 CLK1P49759 484 aaKnown RBP10.7□□□□□ -0.7
HDAC3-204ENST00000469207 POLR2HP52434 150 aaKnown RBP10.7□□□□□ -0.7
HDAC3-204ENST00000469207 UFM1P61960 85 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 CHRNB3Q05901 458 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 IFFO1Q0D2I5 559 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 OR7A5Q15622 319 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 MAPK11Q15759 364 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 CARTPTQ16568 116 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 FAM174BQ3ZCQ3 159 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 OTUD3Q5T2D3 398 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-204ENST00000469207 LINGO2Q7L985 606 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 AAED1Q7RTV5 226 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 GPAT4Q86UL3 456 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 DDIT4LQ96D03 193 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 MSI2Q96DH6 328 aaKnown RBP10.7□□□□□ -0.7
HDAC3-204ENST00000469207 SORT1Q99523 831 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 VRK1Q99986 396 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-204ENST00000469207 NAA11Q9BSU3 229 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-204ENST00000469207 NUF2Q9BZD4 464 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 ADAM19Q9H013 955 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 SEC61A2Q9H9S3 476 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 FKRPQ9H9S5 495 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 EXOSC3Q9NQT5 275 aaKnown RBP10.7□□□□□ -0.7
HDAC3-204ENST00000469207 POLE3Q9NRF9 147 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 PNPOQ9NVS9 261 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 PARPBPQ9NWS1 579 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 DCTN4Q9UJW0 460 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 SLC9A8Q9Y2E8 581 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 AMDHD2Q9Y303 409 aa10.7□□□□□ -0.7
HDAC3-204ENST00000469207 LOC100289279A0A1B0GTE1 492 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 AGAP5A6NIR3 686 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 ZNF208O43345 1280 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 DNPH1O43598 174 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 EIF1BO60739 113 aaKnown RBP10.69□□□□□ -0.7
HDAC3-204ENST00000469207 LGI1O95970 557 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 AGR2O95994 175 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 GUSBP08236 651 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 ALDOCP09972 364 aaKnown RBP10.69□□□□□ -0.7
HDAC3-204ENST00000469207 MPGP29372 298 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 SLC1A3P43003 542 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 NR4A2P43354 598 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 SELENOPP49908 381 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 KHKP50053 298 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 PRPS1P60891 318 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 ABCE1P61221 599 aaKnown RBP10.69□□□□□ -0.7
HDAC3-204ENST00000469207 VSNL1P62760 191 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 EPS8Q12929 822 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 SMU1Q2TAY7 513 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 FAM120AOSQ5T036 256 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 MRPL2Q5T653 305 aaKnown RBP10.69□□□□□ -0.7
HDAC3-204ENST00000469207 ANXA8L1Q5VT79 327 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 VHLLQ6RSH7 139 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 ZNF621Q6ZSS3 439 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 VRK2Q86Y07 508 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
HDAC3-204ENST00000469207 KDM8Q8N371 416 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 RIBC1Q8N443 379 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-204ENST00000469207 VPS37AQ8NEZ2 397 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 OR9K2Q8NGE7 335 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 C19orf24Q9BVV8 132 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 TMEM160Q9NX00 188 aa10.69□□□□□ -0.7
HDAC3-204ENST00000469207 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.68□□□□□ -0.78e-7■■■■□ 25.7
HDAC3-204ENST00000469207 ANK2Q01484 3957 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 A0A096LPE4 126 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 A0A1W2PPZ6 126 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 LRP5LA4QPB2 252 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 CFAP73A6NFT4 308 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 CCDC154A6NI56 674 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 LIPT2A6NK58 231 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 UPK3AO75631 287 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 PRG2P13727 222 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 IL7RP16871 459 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 FKBP2P26885 142 aaKnown RBP10.68□□□□□ -0.7
HDAC3-204ENST00000469207 S100A3P33764 101 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 ACAA2P42765 397 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms