RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ALKBH4Q9NXW9 302 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 DNAJB9Q9UBS3 223 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 RALYQ9UKM9 306 aaKnown RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 SAMHD1Q9Y3Z3 626 aaKnown RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 LYVE1Q9Y5Y7 322 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 ZFYVE26Q68DK2 2539 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 TRBV4-1A0A0J9YWV2 114 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 A0A1W2PNR3 127 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 TNFRSF11BO00300 401 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 KPNA4O00629 521 aaPredicted RBP13.65□□□□□ -0.22
SNIP1-202ENST00000468040 CLOCKO15516 846 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 ZNHIT1O43257 154 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 MT-ATP6P00846 226 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 LDLRP01130 860 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 FUT4P22083 530 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 RPS5P46782 204 aaKnown RBP13.65□□□□□ -0.22
SNIP1-202ENST00000468040 UGT2B15P54855 530 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 RAC3P60763 192 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 SLC35A1P78382 337 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 MFSD13AQ14CX5 517 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 EMC4Q5J8M3 183 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 PODNL1Q6PEZ8 512 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 MBOAT2Q6ZWT7 520 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 LINC00471Q8N535 108 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 MFSD8Q8NHS3 518 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 RELTQ969Z4 430 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 TUBA1CQ9BQE3 449 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 PTDSS2Q9BVG9 487 aa13.65□□□□□ -0.22
SNIP1-202ENST00000468040 MCTS1Q9ULC4 181 aaKnown RBP13.65□□□□□ -0.22
SNIP1-202ENST00000468040 FAM208BQ5VWN6 2430 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 A0A087WUU8 490 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 SH3PXD2BA1X283 911 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 LIPT2A6NK58 231 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 CLCA1A8K7I4 914 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 CXCL13O43927 109 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 EIF1BO60739 113 aaKnown RBP13.64□□□□□ -0.23
SNIP1-202ENST00000468040 E2F6O75461 281 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 SYNGR4O95473 234 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 IMPDH2P12268 514 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 FCGR2AP12318 317 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 PTNP21246 168 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 ACVR2AP27037 513 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 GTF2E2P29084 291 aaKnown RBP13.64□□□□□ -0.23
SNIP1-202ENST00000468040 IFNGR2P38484 337 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 LIMS1P48059 325 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 OR2B6P58173 313 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 OR7A5Q15622 319 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 ATP6AP1Q15904 470 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 ACSF3Q4G176 576 aaPredicted RBP13.64□□□□□ -0.23
SNIP1-202ENST00000468040 C1QL3Q5VWW1 255 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 DOLPP1Q86YN1 238 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 NRMQ8IXM6 262 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 CDK20Q8IZL9 346 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 C10orf53Q8N6V4 93 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 OR4C15Q8NGM1 316 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 TAAR8Q969N4 342 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 FUZQ9BT04 418 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 BDH2Q9BUT1 245 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 CALHM2Q9HA72 323 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 S100A14Q9HCY8 104 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 MEPEQ9NQ76 525 aaPredicted RBP13.64□□□□□ -0.23
SNIP1-202ENST00000468040 TMEM5Q9Y2B1 443 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF175Q9Y473 711 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 U3KQV3 271 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 SVILO95425 2214 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 MED12Q93074 2177 aa13.64□□□□□ -0.23
SNIP1-202ENST00000468040 CD8B2A6NJW9 211 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 ENO4A6NNW6 628 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 FTCDNL1E5RQL4 147 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 H3BNX3 289 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 FZD7O75084 574 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 STSP08842 583 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 FPR1P21462 350 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 ENPP1P22413 925 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 DNAJA1P31689 397 aaKnown RBP13.63□□□□□ -0.23
SNIP1-202ENST00000468040 ARHGDIAP52565 204 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 CTBP2P56545 445 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 NUP107P57740 925 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 PRKCDQ05655 676 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 MRPL49Q13405 166 aaKnown RBP13.63□□□□□ -0.23
SNIP1-202ENST00000468040 PON3Q15166 354 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF74Q16587 644 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF239Q16600 458 aaKnown RBP13.63□□□□□ -0.23
SNIP1-202ENST00000468040 EXOC3L2Q2M3D2 409 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 C1orf185Q5T7R7 199 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 NSUN5P2Q63ZY6 315 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 ADGRE4PQ86SQ3 457 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 OR4K5Q8NGD3 323 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 PFN4Q8NHR9 129 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 PIGXQ8TBF5 258 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 BPIFA2Q96DR5 249 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 SGTBQ96EQ0 304 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 DNAJA3Q96EY1 480 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF845Q96IR2 970 aaPredicted RBP13.63□□□□□ -0.23
SNIP1-202ENST00000468040 UCN2Q96RP3 112 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 TRIB1Q96RU8 372 aa13.63□□□□□ -0.23
SNIP1-202ENST00000468040 NAA11Q9BSU3 229 aaPredicted RBP13.63□□□□□ -0.23
SNIP1-202ENST00000468040 SRXN1Q9BYN0 137 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms