RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 DUSP22Q9NRW4 184 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 USE1Q9NZ43 259 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC23A1Q9UHI7 598 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 HES2Q9Y543 173 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 LRP12Q9Y561 859 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 UBR3Q6ZT12 1888 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 M0QZQ0 153 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 RAF1P04049 648 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ALPLP05186 524 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 C2P06681 752 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 CHRM4P08173 479 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ZNF286BP0CG31 522 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 CXCL8P10145 99 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ST6GAL1P15907 406 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 COMPP49747 757 aaPredicted RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 GTF2BQ00403 316 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 SP3Q02447 781 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 VGLL4Q14135 290 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 SOWAHAQ2M3V2 549 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC8B1Q6J4K2 584 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 LRRC8EQ6NSJ5 796 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 RDH10Q8IZV5 341 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 C1orf87Q8N0U7 546 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 GPR137Q96N19 417 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 WRAP53Q9BUR4 548 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 TRMT61BQ9BVS5 477 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 MAP1LC3CQ9BXW4 147 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC19A3Q9BZV2 496 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 HAPLN2Q9GZV7 340 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 FAM49BQ9NUQ9 324 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 NECAP2Q9NVZ3 263 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 GPATCH2LQ9NWQ4 482 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ANKRD10Q9NXR5 420 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 PITPNC1Q9UKF7 332 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ZFR2Q9UPR6 939 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 PPP1R3CQ9UQK1 317 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 OAS3Q9Y6K5 1087 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ZFC3H1O60293 1989 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ADGRA2Q96PE1 1338 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 FEZF1A0PJY2 475 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 NEMP2A6NFY4 417 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC1A7O00341 560 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ARPC5O15511 151 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 IGHV2-70P01814 119 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 NCK1P16333 377 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 BLKP51451 505 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 RPL15P61313 204 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 SSBP2P81877 361 aaPredicted RBP7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 TAF13Q15543 124 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ZNF699Q32M78 642 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 DNAJC24Q6P3W2 148 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 PPP1R2P1Q96PQ5 205 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 LGMNQ99538 433 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 MRIQ9BWK5 157 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 ACTRT3Q9BYD9 372 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 CSTL1Q9H114 145 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 DYRK4Q9NR20 520 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 GLS2Q9UI32 602 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 COPS3Q9UNS2 423 aa7.04□□□□□ -1.28
SPTBN1-204ENST00000467371 COL4A5P29400 1685 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TRBV11-1A0A0K0K1C0 115 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 PNMA8CA0A1B0GUJ8 204 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RPS10-NUDT3A0A1W2PQS6 291 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 DSCR3O14972 297 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 MRPS14O60783 128 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 MED26O95402 600 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 IFNA5P01569 189 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 NPR2P20594 1047 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ZP3P21754 424 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 FBLP22087 321 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TIMP3P35625 211 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 PIGFQ07326 219 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TRAF3Q13114 568 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 GPNMBQ14956 572 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ARL6IP1Q15041 203 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TATDN3Q17R31 274 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RAB6CQ53S08 254 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 STEAP4Q687X5 459 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ACSM6Q6P461 480 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 TRMT10BQ6PF06 316 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 SLC16A9Q7RTY1 509 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 GALNT10Q86SR1 603 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 NAXDQ8IW45 347 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 C2orf73Q8N5S3 287 aaPredicted RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 OR5T2Q8NGG2 359 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 FEZF2Q8TBJ5 459 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 SAP25Q8TEE9 199 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 CLEC4CQ8WTT0 213 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RORBQ92753 470 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 ROPN1LQ96C74 230 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 WFIKKN1Q96NZ8 548 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RASL10BQ96S79 203 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 DCLRE1CQ96SD1 692 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 C2orf88Q9BSF0 95 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 PCGF1Q9BSM1 259 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 LMF2Q9BU23 707 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 RAB6CQ9H0N0 254 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 DCSTAMPQ9H295 470 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 KCNK15Q9H427 330 aa7.03□□□□□ -1.28
SPTBN1-204ENST00000467371 FN3KQ9H479 309 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms