RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 NTN1O95631 604 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 FKBP2P26885 142 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 POLR2IP36954 125 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 APOBEC1P41238 236 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 TAS2R41P59536 307 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 IL5RAQ01344 420 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 NFATC3Q12968 1075 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 TMEM44Q2T9K0 475 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 KRTCAP3Q53RY4 240 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 RAET1LQ5VY80 246 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 PLEKHM3Q6ZWE6 761 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 YRDCQ86U90 279 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 TSPYL5Q86VY4 417 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 SIAH3Q8IW03 269 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 CISD2Q8N5K1 135 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 PRRC1Q96M27 445 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 ZNF347Q96SE7 839 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 DCUN1D5Q9BTE7 237 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 GMPPBQ9Y5P6 360 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 SMG1Q96Q15 3661 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 A0A0B4J2E0 115 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 A0A1B0GX12 115 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 TRAPPC13A5PLN9 417 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 CPSF4LA6NMK7 179 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 TTLL8A6PVC2 850 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 ZNF99A8MXY4 864 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 SEMA7AO75326 666 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 OR5F1O95221 314 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 IGHG3P01860 377 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 PNMTP11086 282 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 PRKACGP22612 351 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 CHMP24386 653 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 MST1P26927 711 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 POLR2HP52434 150 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 MVKQ03426 396 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 ST3GAL3Q11203 375 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 PIN1Q13526 163 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.34□□□□□ -0.27
DDX56-208ENST00000467318 IQCCQ4KMZ1 466 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 ALG10BQ5I7T1 473 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 WIPI1Q5MNZ9 446 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 ZNF324BQ6AW86 544 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 GTF2IRD2BQ6EKJ0 949 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 GTF2IRD2Q86UP8 949 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 ANKRD13BQ86YJ7 626 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 DRAXINQ8NBI3 349 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 NEIL3Q8TAT5 605 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 IPCEF1Q8WWN9 437 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 ZNF524Q96C55 264 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 SNRNP40Q96DI7 357 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 BARD1Q99728 777 aaKnown RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 PRR14Q9BWN1 585 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 DEFB127Q9H1M4 99 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 LDAHQ9H6V9 325 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 SERINC1Q9NRX5 453 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 PLSCR2Q9NRY7 297 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 TBCCD1Q9NVR7 557 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 KIF17Q9P2E2 1029 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 ACAD8Q9UKU7 415 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 A4GNTQ9UNA3 340 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 RPH3AQ9Y2J0 694 aaPredicted RBP13.34□□□□□ -0.27
DDX56-208ENST00000467318 TRGV5A0A0B4J1U4 118 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 A0A1B0GWA3 101 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 A0A1W2PPW3 197 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 OR2M5A3KFT3 312 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 NPIPA5E9PKD4 350 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 CHP2O43745 196 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 CELA3AP09093 270 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 TACR3P29371 465 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 GFRA1P56159 465 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 FOXF1Q12946 379 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 CTU2Q2VPK5 515 aaKnown RBP13.33□□□□□ -0.28
DDX56-208ENST00000467318 TSEN54Q7Z6J9 526 aaKnown RBP13.33□□□□□ -0.28
DDX56-208ENST00000467318 HS3ST5Q8IZT8 346 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 TBC1D15Q8TC07 691 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 FNDC8Q8TC99 324 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 SLC38A4Q969I6 547 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 C3orf49Q96BT1 292 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 SFXN2Q96NB2 322 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 PIP5K1AQ99755 562 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 FNDC11Q9BVV2 318 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 OCEL1Q9H607 264 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 KRT84Q9NSB2 600 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 PDP1Q9P0J1 537 aaPredicted RBP13.33□□□□□ -0.28
DDX56-208ENST00000467318 OSGIN1Q9UJX0 560 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 RALYQ9UKM9 306 aaKnown RBP13.33□□□□□ -0.28
DDX56-208ENST00000467318 NPIPA1Q9UND3 350 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 NTNG1Q9Y2I2 539 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 SAMHD1Q9Y3Z3 626 aaKnown RBP13.33□□□□□ -0.28
DDX56-208ENST00000467318 SPTA1P02549 2419 aa13.33□□□□□ -0.28
DDX56-208ENST00000467318 A0A1B0GVC2 190 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 PFDN1O60925 122 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 CXCR1P25024 350 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 DAPP51397 102 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 CDH12P55289 794 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 B3GALT5-AS1P59052 145 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 TRILQ7L0X0 811 aa13.32□□□□□ -0.28
DDX56-208ENST00000467318 ATG4DQ86TL0 474 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms