RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ENTPD8Q5MY95 495 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TSPYL5Q86VY4 417 aaPredicted RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 UBALD2Q8IYN6 164 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PNPLA1Q8N8W4 532 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 CD200R1Q8TD46 325 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TRUB1Q8WWH5 349 aaKnown RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 EHFQ9NZC4 300 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 MROH6A6NGR9 719 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ZNF587BE7ETH6 402 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 HSPB6O14558 160 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 PAHP00439 452 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 DRD5P21918 477 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SLC5A2P31639 672 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 CLVS2Q5SYC1 327 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 TMEM135Q86UB9 458 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 PM20D2Q8IYS1 436 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SLC43A2Q8N370 569 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ESX1Q8N693 406 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SLAMF9Q96A28 289 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ANKRD9Q96BM1 317 aaPredicted RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 C4orf36Q96KX1 117 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 B3GAT1Q9P2W7 334 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 GNG12Q9UBI6 72 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 CA5BQ9Y2D0 317 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SLC22A7Q9Y694 548 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 TMEM269A0A1B0GVZ9 245 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 DRGXA6NNA5 263 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 MCRIP1C9JLW8 97 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 TYROBPO43914 113 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SPDEFO95238 335 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 TFP02787 698 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 MAT1AQ00266 395 aaKnown RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 TCEAL1Q15170 157 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SMAD2Q15796 467 aaKnown RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 TMEM176BQ3YBM2 270 aaPredicted RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 PRAMEF20Q5VT98 475 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 FAM83HQ6ZRV2 1179 aaPredicted RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 NDUFAF7Q7L592 441 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 OR2A12Q8NGT7 310 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ZNF419Q96HQ0 510 aaPredicted RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 TMEM59Q9BXS4 323 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SPHK1Q9NYA1 384 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 LY75O60449 1722 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ADAM23O75077 832 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 GSTP1P09211 210 aaKnown RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 FCGR2AP12318 317 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 TPT1P13693 172 aaKnown RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 RAB6AP20340 208 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 IRS1P35568 1242 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 CARD18P57730 90 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 CXCR4P61073 352 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 RAB11AP62491 216 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SPOCK1Q08629 439 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 RPE65Q16518 533 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 C9orf50Q5SZB4 431 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 LHX8Q68G74 356 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 LCN8Q6JVE9 175 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 LETMD1Q6P1Q0 360 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 GPR150Q8NGU9 434 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SGPP1Q9BX95 441 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ELOVL3Q9HB03 270 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 IL26Q9NPH9 171 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 RPS10P5Q9NQ39 176 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 THSD1Q9NS62 852 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 WDR37Q9Y2I8 494 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 RGPD4Q7Z3J3 1758 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 A0A1B0GTW7 788 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 A0A1W2PQL4 384 aaPredicted RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 FRS3O43559 492 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 C1orf105O95561 183 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 PRKAR1BP31321 381 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ZNF252P-AS1Q0IIN9 211 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 IL10RAQ13651 578 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 NKAIN2Q5VXU1 208 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 CST9LP1Q5W188 147 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 CPZQ66K79 652 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 NPSR1Q6W5P4 371 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 GPR26Q8NDV2 337 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SMIM3Q9BZL3 60 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ZNF814B7Z6K7 855 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SURF4O15260 269 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 HTR6P50406 440 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 FAM189BP81408 668 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 MRPS10P82664 201 aaKnown RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 TAZQ16635 292 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 TMEM31Q5JXX7 168 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 ELP2Q6IA86 826 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 PARM1Q6UWI2 310 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 GDPD1Q8N9F7 314 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 CPEB3Q8NE35 698 aaKnown RBP8.12□□□□□ -1.11
HPS4-209ENST00000466781 OR6F1Q8NGZ6 308 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 SLC41A2Q96JW4 573 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 NLKQ9UBE8 527 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 DNAJC15Q9Y5T4 150 aa8.12□□□□□ -1.11
HPS4-209ENST00000466781 GFRA2O00451 464 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 NPBWR1P48145 328 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 SLC14A2Q15849 920 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 TRIM61Q5EBN2 209 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms