RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SLC9A8Q9Y2E8 581 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 FLVCR1Q9Y5Y0 555 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 GPR45Q9Y5Y3 372 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 ZC3H12DA2A288 527 aaKnown RBP16.83■□□□□ 0.28
COL9A3-206ENST00000466532 CFAP73A6NFT4 308 aa16.83■□□□□ 0.28
COL9A3-206ENST00000466532 TTKP33981 857 aa16.83■□□□□ 0.28
COL9A3-206ENST00000466532 EPS8Q12929 822 aa16.83■□□□□ 0.28
COL9A3-206ENST00000466532 C9orf135Q5VTT2 229 aa16.83■□□□□ 0.28
COL9A3-206ENST00000466532 DEPDC4Q8N2C3 294 aa16.83■□□□□ 0.28
COL9A3-206ENST00000466532 ADAD1Q96M93 576 aaKnown RBP16.83■□□□□ 0.28
COL9A3-206ENST00000466532 DHRS9Q9BPW9 319 aa16.83■□□□□ 0.28
COL9A3-206ENST00000466532 C1QTNF6Q9BXI9 259 aa16.83■□□□□ 0.28
COL9A3-206ENST00000466532 WDR55Q9H6Y2 383 aaPredicted RBP16.83■□□□□ 0.28
COL9A3-206ENST00000466532 TRPC5OSA6NMA1 111 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 PDLIM1O00151 329 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 HDAC3O15379 428 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 KRT75O95678 551 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 KITP10721 976 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 MAP2K6P52564 334 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 NUDT6P53370 316 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 IRX1P78414 480 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-206ENST00000466532 SLC17A1Q14916 467 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 C11orf71Q6IPW1 123 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 PAQR6Q6TCH4 344 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 PEX5LQ8IYB4 626 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 FBXL14Q8N1E6 418 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 GLB1L3Q8NCI6 653 aaPredicted RBP16.82■□□□□ 0.28
COL9A3-206ENST00000466532 RHNO1Q9BSD3 238 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 AMBRA1Q9C0C7 1298 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 SLC7A10Q9NS82 523 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 CBLN4Q9NTU7 201 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 RLIMQ9NVW2 624 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 DCTN4Q9UJW0 460 aa16.82■□□□□ 0.28
COL9A3-206ENST00000466532 ARFGEF3Q5TH69 2177 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 RFXANKO14593 260 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 CD5LO43866 347 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 CXCR1P25024 350 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 FABP6P51161 128 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 OTUD3Q5T2D3 398 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-206ENST00000466532 TSPO2Q5TGU0 170 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 NXNQ6DKJ4 435 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 B3GLCTQ6Y288 498 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 CROCCP2Q86T23 111 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 ZNF440Q8IYI8 595 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 MUC15Q8N387 334 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 WDR31Q8NA23 367 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 C1orf162Q8NEQ5 155 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-206ENST00000466532 ADAM19Q9H013 955 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 YAE1D1Q9NRH1 226 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 THAP1Q9NVV9 213 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 P2RX2Q9UBL9 471 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 AMDHD2Q9Y303 409 aa16.81■□□□□ 0.28
COL9A3-206ENST00000466532 CDHR4A6H8M9 788 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 TLX2O43763 284 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-206ENST00000466532 SNNO75324 88 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-206ENST00000466532 AKR7A3O95154 331 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 IL6P05231 212 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 GPIP06744 558 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 GKN3PP0CG01 181 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 WDR4P57081 412 aaKnown RBP16.8■□□□□ 0.28
COL9A3-206ENST00000466532 TGFBR3Q03167 851 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 CEACAM7Q14002 265 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 OR7A5Q15622 319 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 MAPK11Q15759 364 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 GSTA3Q16772 222 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 LIN52Q52LA3 116 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 ZNF836Q6ZNA1 936 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 VRK2Q86Y07 508 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 CADM2Q8N3J6 435 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 C17orf78Q8N4C9 275 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 TMEM99Q8N816 258 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 OR52P1PQ8NH57 321 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 MGARPQ8TDB4 240 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 TMEM45BQ96B21 275 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 SLC17A5Q9NRA2 495 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 SLC6A13Q9NSD5 602 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 RAB21Q9UL25 225 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 ATP23Q9Y6H3 246 aa16.8■□□□□ 0.28
COL9A3-206ENST00000466532 DSPPQ9NZW4 1301 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 IGHV4-30-2A0A087WSY4 118 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 TMEM120BA0PK00 339 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 LIPT2A6NK58 231 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 SLC22A3O75751 556 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 ANP32DO95626 131 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 BCHEP06276 602 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 ETFAP13804 333 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 IDO1P14902 403 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 CRATP43155 626 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 MVDP53602 400 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 RAB35Q15286 201 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 PDCD4Q53EL6 469 aaKnown RBP16.79■□□□□ 0.28
COL9A3-206ENST00000466532 ZNF544Q6NX49 715 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 CLEC2AQ6UVW9 174 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 CXXC5Q7LFL8 322 aaKnown RBP16.79■□□□□ 0.28
COL9A3-206ENST00000466532 AAED1Q7RTV5 226 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 OR9K2Q8NGE7 335 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 HTRA1Q92743 480 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 CALML5Q9NZT1 146 aa16.79■□□□□ 0.28
COL9A3-206ENST00000466532 FBN1P35555 2871 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms