RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 SNX13Q9Y5W8 968 aa18.14■□□□□ 0.49
PTCD3-206ENST00000465560 IGHV3-15A0A0B4J1V0 119 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 TRAPPC13A5PLN9 417 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 NKX2-6A6NCS4 301 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 CHP2O43745 196 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 SS18L1O75177 396 aaPredicted RBP18.13■□□□□ 0.49
PTCD3-206ENST00000465560 MSX2P35548 267 aaPredicted RBP18.13■□□□□ 0.49
PTCD3-206ENST00000465560 AGFG1P52594 562 aaKnown RBP18.13■□□□□ 0.49
PTCD3-206ENST00000465560 OR2B6P58173 313 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 SLC35A1P78382 337 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 EGR4Q05215 589 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 C1orf140Q5VVS0 124 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 C5orf46Q6UWT4 87 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 DEF8Q6ZN54 512 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 SLC43A2Q8N370 569 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 ABHD3Q8WU67 409 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 GEMIN6Q8WXD5 167 aaKnown RBP18.13■□□□□ 0.49
PTCD3-206ENST00000465560 HSH2DQ96JZ2 352 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 KCNJ16Q9NPI9 418 aa18.13■□□□□ 0.49
PTCD3-206ENST00000465560 DCAF13Q9NV06 445 aaKnown RBP18.13■□□□□ 0.49
PTCD3-206ENST00000465560 SAMD4AQ9UPU9 718 aaKnown RBP18.13■□□□□ 0.49
PTCD3-206ENST00000465560 ADGRG4Q8IZF6 3080 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 IGKV1D-42A0A075B6H8 117 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 LIPT2A6NK58 231 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 ARPC2O15144 300 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 CYTIPO60759 359 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 AHSA1O95433 338 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 PLGP00747 810 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-206ENST00000465560 THY1P04216 161 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 GPIP06744 558 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 KLK2P20151 261 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 KIR2DL2P43627 348 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-206ENST00000465560 TFF3Q07654 80 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 IFI44LQ53G44 452 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 ABLIM2Q6H8Q1 611 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 FAM214BQ7L5A3 538 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 MCEMP1Q8IX19 187 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 CNEP1R1Q8N9A8 125 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 RNF217Q8TC41 542 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 PIGMQ9H3S5 423 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 GP6Q9HCN6 339 aa18.12■□□□□ 0.49
PTCD3-206ENST00000465560 PLEKHB1Q9UF11 243 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-206ENST00000465560 PRSS44E7EML9 344 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 EIF1BO60739 113 aaKnown RBP18.11■□□□□ 0.49
PTCD3-206ENST00000465560 PRKD3O94806 890 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 LYPD3O95274 346 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 IFNW1P05000 195 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 FPR1P21462 350 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 TAS2R41P59536 307 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 SIRPAP78324 504 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 H3F3AP84243 136 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 BNIP1Q12981 228 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 OR7A5Q15622 319 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 DNAL1Q4LDG9 190 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 VWA1Q6PCB0 445 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 LINC00114Q6XXX2 140 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 FKBP9P1Q75LS8 142 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 SLC7A6OSQ96CW6 309 aaPredicted RBP18.11■□□□□ 0.49
PTCD3-206ENST00000465560 STARD4Q96DR4 205 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 SLC41A3Q96GZ6 507 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 NSMCE2Q96MF7 247 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 TMEM43Q9BTV4 400 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 PTDSS2Q9BVG9 487 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 TAPBPLQ9BX59 468 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 JKAMPQ9P055 326 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 KLHL9Q9P2J3 617 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 KLHL13Q9P2N7 655 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 SLC7A7Q9UM01 511 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 CLEC4AQ9UMR7 237 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 EMC9Q9Y3B6 208 aa18.11■□□□□ 0.49
PTCD3-206ENST00000465560 FREM1Q5H8C1 2179 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 OR5F1O95221 314 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 AGTR1P30556 359 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 ASCL1P50553 236 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 CTBP2P56545 445 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 RASGEF1BQ0VAM2 473 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 FBXL19-AS1Q494R0 122 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 PAQR6Q6TCH4 344 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 WDR88Q6ZMY6 472 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 GDF7Q7Z4P5 450 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 OR6K3Q8NGY3 331 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 MFSD8Q8NHS3 518 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 PIGXQ8TBF5 258 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 KTI12Q96EK9 354 aaPredicted RBP18.1■□□□□ 0.49
PTCD3-206ENST00000465560 MPP4Q96JB8 637 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 PRRC1Q96M27 445 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 PSD2Q9BQI7 771 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 NAA11Q9BSU3 229 aaPredicted RBP18.1■□□□□ 0.49
PTCD3-206ENST00000465560 AMBRA1Q9C0C7 1298 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 MUC13Q9H3R2 512 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 BCO1Q9HAY6 547 aa18.1■□□□□ 0.49
PTCD3-206ENST00000465560 ING1Q9UK53 422 aaPredicted RBP18.1■□□□□ 0.49
PTCD3-206ENST00000465560 HECTD1Q9ULT8 2610 aa18.09■□□□□ 0.49
PTCD3-206ENST00000465560 TRAV36DV7A0A075B6V5 113 aa18.09■□□□□ 0.49
PTCD3-206ENST00000465560 ZNF814B7Z6K7 855 aa18.09■□□□□ 0.49
PTCD3-206ENST00000465560 EEF1E1-BLOC1S5C9J1V9 151 aa18.09■□□□□ 0.49
PTCD3-206ENST00000465560 FTCDNL1E5RQL4 147 aa18.09■□□□□ 0.49
PTCD3-206ENST00000465560 GYG2O15488 501 aa18.09■□□□□ 0.49
PTCD3-206ENST00000465560 EEF1E1O43324 174 aaKnown RBP18.09■□□□□ 0.49
PTCD3-206ENST00000465560 OR2T1O43869 369 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms