RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RNF148Q8N7C7 305 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 SLC47A1Q96FL8 570 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 CDRT15Q96T59 188 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 PSD2Q9BQI7 771 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 PTDSS2Q9BVG9 487 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 BCO1Q9HAY6 547 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 SH3GLB1Q9Y371 365 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 LIPT2A6NK58 231 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 ELOA3DA6NLF2 546 aaPredicted RBP18.12■□□□□ 0.49
SKA3-205ENST00000465471 PRKD3O94806 890 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 CD8BP10966 210 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 AGTR1P30556 359 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 IDUAP35475 653 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 CDH12P55289 794 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 SLC35A1P78382 337 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 MXRA7P84157 204 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 ELOA3BQ3SY89 546 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 C1orf140Q5VVS0 124 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 GTF2IRD2BQ6EKJ0 949 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 C5orf46Q6UWT4 87 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 LINC00114Q6XXX2 140 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 BTLAQ7Z6A9 289 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 GTF2IRD2Q86UP8 949 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 CNEP1R1Q8N9A8 125 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 ELOA3Q8NG57 546 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 OR6K3Q8NGY3 331 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 ADAMTS16Q8TE57 1224 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 DNAJA3Q96EY1 480 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 ENKD1Q9H0I2 346 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 KLHL13Q9P2N7 655 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 EGFL7Q9UHF1 273 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 CLEC4AQ9UMR7 237 aa18.12■□□□□ 0.49
SKA3-205ENST00000465471 SETXQ7Z333 2677 aaKnown RBP18.12■□□□□ 0.49
SKA3-205ENST00000465471 IGKV3D-15A0A087WSY6 115 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 CPSF4LA6NMK7 179 aaKnown RBP18.11■□□□□ 0.49
SKA3-205ENST00000465471 ZNF814B7Z6K7 855 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 FTCDNL1E5RQL4 147 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 MSTNO14793 375 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 CHP2O43745 196 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 EIF1BO60739 113 aaKnown RBP18.11■□□□□ 0.49
SKA3-205ENST00000465471 SERPINA1P01009 418 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 NCK1P16333 377 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 SIRPAP78324 504 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 CEACAM7Q14002 265 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 PDK3Q15120 406 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 HIST2H2BCQ6DN03 193 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 RINLQ6ZS11 566 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 FAM156AQ8NDB6 213 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 LZICQ8WZA0 190 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 ZHX1-C8orf76Q96EF9 292 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 POLR2J2Q9GZM3 115 aaKnown RBP18.11■□□□□ 0.49
SKA3-205ENST00000465471 POLR2J3Q9H1A7 115 aaKnown RBP18.11■□□□□ 0.49
SKA3-205ENST00000465471 C1orf21Q9H246 121 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 ADPRHL2Q9NX46 363 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 KLHL9Q9P2J3 617 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 EMC9Q9Y3B6 208 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 UNC79Q9P2D8 2635 aa18.11■□□□□ 0.49
SKA3-205ENST00000465471 TRAPPC13A5PLN9 417 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 ZNF716A6NP11 495 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 A8MXE2 369 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 EEF1E1-BLOC1S5C9J1V9 151 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 EEF1E1O43324 174 aaKnown RBP18.1■□□□□ 0.49
SKA3-205ENST00000465471 UBOX5O94941 541 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 PLGP00747 810 aaPredicted RBP18.1■□□□□ 0.49
SKA3-205ENST00000465471 GPIP06744 558 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 OR1E2P47887 323 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 SLC16A1P53985 500 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 OR2B6P58173 313 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 SP5Q6BEB4 398 aaPredicted RBP18.1■□□□□ 0.49
SKA3-205ENST00000465471 GLYATQ6IB77 296 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 PAQR6Q6TCH4 344 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 WDR88Q6ZMY6 472 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 VTCN1Q7Z7D3 282 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 MCEMP1Q8IX19 187 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 ARHGAP24Q8N264 748 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 MFSD8Q8NHS3 518 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 RNASE6Q93091 150 aaKnown RBP18.1■□□□□ 0.49
SKA3-205ENST00000465471 KTI12Q96EK9 354 aaPredicted RBP18.1■□□□□ 0.49
SKA3-205ENST00000465471 TPD52L3Q96J77 140 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 TACO1Q9BSH4 297 aaKnown RBP18.1■□□□□ 0.49
SKA3-205ENST00000465471 TMEM43Q9BTV4 400 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 ZNF426Q9BUY5 554 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 GORASP2Q9H8Y8 452 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 PLSCR4Q9NRQ2 329 aa18.1■□□□□ 0.49
SKA3-205ENST00000465471 FOXD3Q9UJU5 478 aaPredicted RBP18.1■□□□□ 0.49
SKA3-205ENST00000465471 ZNF724A8MTY0 619 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 RAMP1O60894 148 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 AHSA1O95433 338 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 FPR1P21462 350 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 PCYT1AP49585 367 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 P2RY4P51582 365 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 CTBP2P56545 445 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 RASGEF1BQ0VAM2 473 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 OR7A5Q15622 319 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 TUSC5Q8IXB3 177 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 OR6S1Q8NH40 331 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 PIGXQ8TBF5 258 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 FAM162AQ96A26 154 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 HSH2DQ96JZ2 352 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 SPOCK3Q9BQ16 436 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms