RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 C8orf44Q96CB5 159 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 CCNL2Q96S94 520 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 WDR77Q9BQA1 342 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 RACGAP1Q9H0H5 632 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 FN3KQ9H479 309 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 MED20Q9H944 212 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 WDR54Q9H977 334 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 CMC2Q9NRP2 79 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 TOR4AQ9NXH8 423 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 NCDNQ9UBB6 729 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 GPN3Q9UHW5 284 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 BAIAP2Q9UQB8 552 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 EXOSC1Q9Y3B2 195 aaKnown RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 PCDHGA3Q9Y5H0 932 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 LOC100506127A0A0U1RQW1 187 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 RIIAD1A6NNX1 92 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 C17orf51A8MQB3 221 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 ALG1L2C9J202 215 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 LRRN3E7EW58 273 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 CCRL2O00421 344 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 RGS13O14921 159 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SCO2O43819 266 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 OR7A10O76100 309 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 PTTG1O95997 202 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SCG5P05408 212 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SOX3P41225 446 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 NRG3P56975 720 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 PSPHP78330 225 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 C1DQ13901 141 aaKnown RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SSX1Q16384 188 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 DCAF12Q5T6F0 453 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 NIPAL3Q6P499 406 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 RTL4Q6ZR62 310 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 RAB11FIP2Q7L804 512 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 LRRC17Q8N6Y2 441 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 GALNT6Q8NCL4 622 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 KBTBD8Q8NFY9 601 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 THAP3Q8WTV1 239 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 TP53INP1Q96A56 240 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 NACC2Q96BF6 587 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 LPAR4Q99677 370 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 CDADC1Q9BWV3 514 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 CCDC59Q9P031 241 aaKnown RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 NXT1Q9UKK6 140 aaKnown RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 C9J4A7 227 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 EIF4E2O60573 245 aaKnown RBP13.2□□□□□ -0.3
HDAC6-213ENST00000462730 DLGAP3O95886 979 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 MST1P26927 711 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 EVI2BP34910 448 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 SLC9A3P48764 834 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF45Q02386 682 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 CDCP2Q5VXM1 449 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 TMEM205Q6UW68 189 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF517Q6ZMY9 492 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-213ENST00000462730 AKAP14Q86UN6 197 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 OR4F15Q8NGB8 312 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF524Q96C55 264 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 DEPDC7Q96QD5 511 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 CHCHD6Q9BRQ6 235 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 C19orf25Q9UFG5 118 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-213ENST00000462730 PISDQ9UG56 409 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
HDAC6-213ENST00000462730 OTOGLQ3ZCN5 2332 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 OR6C70A6NIJ9 312 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 FAM47E-STBD1D6RA91 191 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 FADS1O60427 444 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 NDUFB2O95178 105 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 CYC1P08574 325 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 HK1P19367 917 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 ITPKBP27987 946 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 S100A5P33763 92 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 SLC1A3P43003 542 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 ARHGAP11AQ6P4F7 1023 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 ATCAYQ86WG3 371 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 PARP16Q8N5Y8 322 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 FAM83FQ8NEG4 500 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-213ENST00000462730 LIN37Q96GY3 246 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-213ENST00000462730 TMEM43Q9BTV4 400 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 HCAR1Q9BXC0 346 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 FAM86C1Q9NVL1 165 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 EXOGQ9Y2C4 368 aaKnown RBP13.2□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF337Q9Y3M9 751 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 NPFFR2Q9Y5X5 522 aa13.2□□□□□ -0.3
HDAC6-213ENST00000462730 TMEM129A0AVI4 362 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 ZC3H12DA2A288 527 aaKnown RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 PRR23D1E9PI22 279 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 WWP2O00308 870 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 SNPHO15079 494 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 STK17BO94768 372 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 JMJD7P0C870 316 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 PRR23D2P0DMB1 279 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 ZNF3P17036 446 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 ENDOUP21128 410 aaKnown RBP13.19□□□□□ -0.3
HDAC6-213ENST00000462730 TACR3P29371 465 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 NOS3P29474 1203 aa13.19□□□□□ -0.3
HDAC6-213ENST00000462730 ATP6V1E1P36543 226 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms