RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TMEM247A6NEH6 219 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 TRIM64A6NGJ6 449 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 TRIM64BA6NI03 449 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 FAM171A2A8MVW0 826 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 CLIC1O00299 241 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 POLR3GO15318 223 aaPredicted RBP16.7■□□□□ 0.26
VARS-220ENST00000461874 SOD3P08294 240 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 NUDT7P0C024 238 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 DANCRP0C864 163 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 HOXB9P17482 250 aaPredicted RBP16.7■□□□□ 0.26
VARS-220ENST00000461874 CXCR1P25024 350 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 IDH3AP50213 366 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 ATP5J2P56134 94 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 STX1BP61266 288 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 COPZ1P61923 177 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 RPS4XP62701 263 aaKnown RBP16.7■□□□□ 0.26
VARS-220ENST00000461874 LTBQ06643 244 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 SLC17A1Q14916 467 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 WBP2NLQ6ICG8 309 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 PAQR6Q6TCH4 344 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 Q71RC1 249 aaPredicted RBP16.7■□□□□ 0.26
VARS-220ENST00000461874 CADM2Q8N3J6 435 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 KBTBD8Q8NFY9 601 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 SMAP2Q8WU79 429 aaPredicted RBP16.7■□□□□ 0.26
VARS-220ENST00000461874 ATP6V1G3Q96LB4 118 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 SPATA9Q9BWV2 254 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 TRIM2Q9C040 744 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 BCL2L10Q9HD36 194 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 ASB6Q9NWX5 421 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 NPAP1Q9NZP6 1156 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 A0A096LPI6 279 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 CIB4A0PJX0 185 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 LIPT2A6NK58 231 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 OVOL3O00110 214 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 RAD51DO75771 328 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 BMP2P12643 396 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 PRG2P13727 222 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 IDUAP35475 653 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 FADDQ13158 208 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 CEACAM7Q14002 265 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 PRAMEF8Q5VWM4 474 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 PRAMEF7Q5VXH5 474 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 BLOC1S3Q6QNY0 202 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 CASP12Q6UXS9 341 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 FUNDC1Q8IVP5 155 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 EBF4Q9BQW3 602 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 CCDC28BQ9BUN5 200 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 RAD21L1Q9H4I0 556 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 ARMC7Q9H6L4 198 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 CACYBPQ9HB71 228 aaKnown RBP16.69■□□□□ 0.26
VARS-220ENST00000461874 A4GALTQ9NPC4 353 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 PARPBPQ9NWS1 579 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 TAS2R16Q9NYV7 291 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 SLC9A8Q9Y2E8 581 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 IFT52Q9Y366 437 aa16.69■□□□□ 0.26
VARS-220ENST00000461874 CCT8L1PA6NM43 557 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 PDLIM1O00151 329 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 LY6G6DO95868 133 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 GPIP06744 558 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 HEXAP06865 529 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 FOXG1P55316 489 aaPredicted RBP16.68■□□□□ 0.26
VARS-220ENST00000461874 FAPQ12884 760 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 BNIP2Q12982 314 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 OR7A5Q15622 319 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 TTMPQ5BVD1 217 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 OTUD3Q5T2D3 398 aaPredicted RBP16.68■□□□□ 0.26
VARS-220ENST00000461874 GOLGA6L1Q8N7Z2 621 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 TMEM99Q8N816 258 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 OR52E4Q8NGH9 312 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 MAL2Q969L2 176 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 MUS81Q96NY9 551 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 SLC25A37Q9NYZ2 338 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 SLC25A15Q9Y619 301 aa16.68■□□□□ 0.26
VARS-220ENST00000461874 FN1P02751 2386 aaKnown RBP16.67■□□□□ 0.26
VARS-220ENST00000461874 A8MVM7 634 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 SHISA9B4DS77 424 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 SMAD7O15105 426 aaKnown RBP16.67■□□□□ 0.26
VARS-220ENST00000461874 AKR7A3O95154 331 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 ITGA5P08648 1049 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 NCF2P19878 526 aaPredicted RBP16.67■□□□□ 0.26
VARS-220ENST00000461874 AQP5P55064 265 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 GABRA6Q16445 453 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 PGGHGQ32M88 737 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 ZNF311Q5JNZ3 666 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 LRIF1Q5T3J3 769 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 OR7E24Q6IFN5 339 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 SERPINA11Q86U17 422 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 MSRB3Q8IXL7 192 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 OR9K2Q8NGE7 335 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 TMEM45BQ96B21 275 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 C3orf49Q96BT1 292 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 SPDL1Q96EA4 605 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 SF3B5Q9BWJ5 86 aaKnown RBP16.67■□□□□ 0.26
VARS-220ENST00000461874 SLC52A3Q9NQ40 469 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 CISD1Q9NZ45 108 aaKnown RBP16.67■□□□□ 0.26
VARS-220ENST00000461874 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
VARS-220ENST00000461874 MAGED1Q9Y5V3 778 aaPredicted RBP16.67■□□□□ 0.26
VARS-220ENST00000461874 ZANQ9Y493 2812 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 A0A1W2PP18 115 aa16.66■□□□□ 0.26
VARS-220ENST00000461874 AQP7P3A6NL99 342 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms