RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GTF2H4Q92759 462 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 SLC35B4Q969S0 331 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 APH1AQ96BI3 265 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 DDIT4LQ96D03 193 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 MUCL1Q96DR8 90 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 ITCHQ96J02 903 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 RADILQ96JH8 1075 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 C7orf26Q96N11 449 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 NAA11Q9BSU3 229 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 TRIM2Q9C040 744 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 BCL2L10Q9HD36 194 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 PARPBPQ9NWS1 579 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 P2RX2Q9UBL9 471 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 MALT1Q9UDY8 824 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 NOSIPQ9Y314 301 aaKnown RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 USF3Q68DE3 2245 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 FAM234BA2RU67 622 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 H7C1Q1 480 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 PDLIM1O00151 329 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 MRPL33O75394 65 aaKnown RBP8.07□□□□□ -1.12
BRCA1-207ENST00000461798 SOD3P08294 240 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 ETFAP13804 333 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 HOXB9P17482 250 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-207ENST00000461798 CRATP43155 626 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 CRISP3P54108 245 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 DSTNP60981 165 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 RPS4XP62701 263 aaKnown RBP8.07□□□□□ -1.12
BRCA1-207ENST00000461798 CAPRIN1Q14444 709 aaKnown RBP8.07□□□□□ -1.12
BRCA1-207ENST00000461798 SLC17A1Q14916 467 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 ETFDHQ16134 617 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 GABRA6Q16445 453 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 LIN52Q52LA3 116 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 WBP2NLQ6ICG8 309 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 OR7E24Q6IFN5 339 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 PAQR6Q6TCH4 344 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 VRK2Q86Y07 508 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 SMAP2Q8WU79 429 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-207ENST00000461798 FBXW5Q969U6 566 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM45BQ96B21 275 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 BOD1Q96IK1 185 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 SF3B5Q9BWJ5 86 aaKnown RBP8.07□□□□□ -1.12
BRCA1-207ENST00000461798 SPATA9Q9BWV2 254 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 PAIP1Q9H074 479 aaKnown RBP8.07□□□□□ -1.12
BRCA1-207ENST00000461798 RLIMQ9NVW2 624 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM45AQ9NWC5 275 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 ASB6Q9NWX5 421 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 TAS2R16Q9NYV7 291 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 NPAP1Q9NZP6 1156 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 ZNF232Q9UNY5 417 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 LAMP3Q9UQV4 416 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 IFT52Q9Y366 437 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 CHST2Q9Y4C5 530 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 FLVCR1Q9Y5Y0 555 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 SLC25A15Q9Y619 301 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 GMEB1Q9Y692 573 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 USH1CQ9Y6N9 552 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 CADP27708 2225 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 CSPG4Q6UVK1 2322 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 VPS13CQ709C8 3753 aa8.07□□□□□ -1.12
BRCA1-207ENST00000461798 A0A096LPI6 279 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ZC3H12DA2A288 527 aaKnown RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 TRIM64A6NGJ6 449 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 TRIM64BA6NI03 449 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 LIPT2A6NK58 231 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 A8MVM7 634 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 SHISA9B4DS77 424 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 CLOCKO15516 846 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 NPIPB7O75200 414 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 VAMP5O95183 116 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ANP32DO95626 131 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 CCNA2P20248 432 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 CXCR1P25024 350 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 PTAFRP25105 342 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ATP5J2P56134 94 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 IRX1P78414 480 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 FADDQ13158 208 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 LARS2Q15031 903 aaKnown RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 RGNQ15493 299 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 PGGHGQ32M88 737 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 GTDC1Q4AE62 458 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 LRIF1Q5T3J3 769 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ZNF836Q6ZNA1 936 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 DNM1P46Q6ZS02 220 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ATG4DQ86TL0 474 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 DTX2Q86UW9 622 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 FUNDC1Q8IVP5 155 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 CLIP4Q8N3C7 705 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 ZIC4Q8N9L1 334 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 C1orf162Q8NEQ5 155 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 OR9I1Q8NGQ6 314 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 NEUROG1Q92886 237 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 VPS33AQ96AX1 596 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 TRMT61AQ96FX7 289 aaKnown RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 AURKBQ96GD4 344 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM19Q96HH6 336 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 CCDC28BQ9BUN5 200 aa8.06□□□□□ -1.12
BRCA1-207ENST00000461798 RAD21L1Q9H4I0 556 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms