RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 IGHV3-23P01764 117 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 ALOX5P09917 674 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 SULT1E1P49888 294 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 CDH4P55283 916 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 ATP5IP56385 69 aaPredicted RBP2.8□□□□□ -1.96
CLK1-206ENST00000461326 BCL2L1Q07817 233 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 CCDC173Q0VFZ6 552 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 KLRB1Q12918 225 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 CUL1Q13616 776 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 ZNF239Q16600 458 aaKnown RBP2.8□□□□□ -1.96
CLK1-206ENST00000461326 ISXQ2M1V0 245 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 KLHL38Q2WGJ6 581 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 C1orf220Q5T0J3 134 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 OR4F3Q6IEY1 312 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 UTS2BQ765I0 119 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 ZBED8Q8IZ13 594 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 LINC00612Q8N6U2 182 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 ATP6V0D2Q8N8Y2 350 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 MFSD9Q8NBP5 474 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 N4BP2L2Q92802 583 aaPredicted RBP2.8□□□□□ -1.96
CLK1-206ENST00000461326 NEIL2Q969S2 332 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 SEC22AQ96IW7 307 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 MYCBPQ99417 103 aaPredicted RBP2.8□□□□□ -1.96
CLK1-206ENST00000461326 COPS8Q99627 209 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 GCOM2Q9BZD3 368 aaPredicted RBP2.8□□□□□ -1.96
CLK1-206ENST00000461326 CHIAQ9BZP6 476 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 SLITRK2Q9H156 845 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 POPDC2Q9HBU9 364 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 MCCC2Q9HCC0 563 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 LCMT1Q9UIC8 334 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 PTBP2Q9UKA9 531 aaKnown RBP2.8□□□□□ -1.96
CLK1-206ENST00000461326 ADAM28Q9UKQ2 775 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 VSIG4Q9Y279 399 aa2.8□□□□□ -1.96
CLK1-206ENST00000461326 DNMT1P26358 1616 aaKnown RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 ARHGEF5Q12774 1597 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 MBD5Q9P267 1494 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 MLH3Q9UHC1 1453 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 FGD6Q6ZV73 1430 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 MIA2Q96PC5 1412 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 KIAA1107Q9UPP5 1409 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 RPAP1Q9BWH6 1393 aaPredicted RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 KLF18A0A0U1RQI7 1052 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 IDSB3KWA1 339 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 PHOX2AO14813 284 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 HCRTR1O43613 425 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 FCMRO60667 390 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 GIG44P09565 113 aaPredicted RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 P0C879 139 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 PSMB1P20618 241 aaKnown RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 GCAP28676 217 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 RGRP47804 291 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 IGLV3-21P80748 117 aaPredicted RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 TRPM8Q7Z2W7 1104 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 NBPF5PQ86XG9 351 aaPredicted RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 ZNF677Q86XU0 584 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 DNAJA4Q8WW22 397 aaPredicted RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 B3GALT6Q96L58 329 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 NOL4LQ96MY1 436 aaPredicted RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 CLCC1Q96S66 551 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 NPY6RQ99463 290 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 ZNF184Q99676 751 aaPredicted RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 NMUR2Q9GZQ4 415 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 ZDHHC11Q9H8X9 412 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 RPS10P5Q9NQ39 176 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 TMEM9Q9P0T7 183 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 TP53TG3Q9ULZ0 132 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 TMCO1Q9UM00 188 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 MOKQ9UQ07 419 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 RPL36Q9Y3U8 105 aaKnown RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 N6AMT1Q9Y5N5 214 aa2.79□□□□□ -1.96
CLK1-206ENST00000461326 CLTCQ00610 1675 aaKnown RBP2.79□□□□□ -1.96
CLK1-206ENST00000461326 REREQ9P2R6 1566 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 A2MP01023 1474 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 SH3TC1Q8TE82 1336 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 CLSPNQ9HAW4 1339 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 EPOPA6NHQ4 379 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 OR52A4PA6NMU1 304 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 HIP1O00291 1037 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 NBR2O15453 112 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 TIMM8AO60220 97 aaPredicted RBP2.78□□□□□ -1.96
CLK1-206ENST00000461326 PFKFB2O60825 505 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 RAMP3O60896 148 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 DIRAS1O95057 198 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 SNX4O95219 450 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 LYPD3O95274 346 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 CCDC166P0CW27 439 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 IL12AP29459 219 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 CALCRP30988 508 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 RFC4P35249 363 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 UGT1A5P35504 534 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 PTGDSP41222 190 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 BTDP43251 543 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 MAGEA8P43361 318 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 DUSP3P51452 185 aaPredicted RBP2.78□□□□□ -1.96
CLK1-206ENST00000461326 HSPA2P54652 639 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 PKNOX1P55347 436 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 ZNF45Q02386 682 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 EGFEM1PQ0D2K5 195 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 SSX2Q16385 188 aa2.78□□□□□ -1.96
CLK1-206ENST00000461326 IMMTQ16891 758 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms