RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 FAM222BQ8WU58 562 aa9.57□□□□□ -0.88
UBR4-208ENST00000459947 CDRT15Q96T59 188 aa9.57□□□□□ -0.88
UBR4-208ENST00000459947 HDHD5Q9BXW7 423 aa9.57□□□□□ -0.88
UBR4-208ENST00000459947 NPIPB7O75200 414 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 GCM2O75603 506 aaPredicted RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 TOXO94900 526 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 OPN1SWP03999 348 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 TAF11Q15544 211 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 OFCC1Q8IZS5 231 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 PLSCR4Q9NRQ2 329 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 KCNN3Q9UGI6 736 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 AQP7P3A6NL99 342 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 ENTPD5O75356 428 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 TGM6O95932 706 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 PRG2P13727 222 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 TRAP1Q12931 704 aaKnown RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 ENTPD8Q5MY95 495 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 FKBP9P1Q75LS8 142 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 CNEP1R1Q8N9A8 125 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 RBM24Q9BX46 236 aaKnown RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 C6orf203Q9P0P8 240 aaPredicted RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 CD300AQ9UGN4 299 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 TMEM5Q9Y2B1 443 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 ZZEF1O43149 2961 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 LOC102725191A0A1B0GVB3 256 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 ZNF682O95780 498 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 BMP5P22003 454 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 TRAM2Q15035 370 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 DUSP7Q16829 419 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 RNF113BQ8IZP6 322 aaKnown RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 ACBD4Q8NC06 268 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 VANGL1Q8TAA9 524 aaPredicted RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 SLC41A3Q96GZ6 507 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 TPD52L3Q96J77 140 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 ENKD1Q9H0I2 346 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 MMADHCQ9H3L0 296 aaPredicted RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 DCAF13Q9NV06 445 aaKnown RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 ACTR3BQ9P1U1 418 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 EEF1E1-BLOC1S5C9J1V9 151 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 M0R3H8 397 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 EEF1E1O43324 174 aaKnown RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 SERPINA1P01009 418 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 HTR2AP28223 471 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 AGTR1P30556 359 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 SSTR2P30874 369 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 CD79BP40259 229 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 RPRMLQ8N4K4 120 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 OR6T1Q8NGN1 323 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 LRGUKQ96M69 825 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 ZNF347Q96SE7 839 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 FNDC11Q9BVV2 318 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 SRXN1Q9BYN0 137 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 TRIM8Q9BZR9 551 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 FKRPQ9H9S5 495 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 MOV10Q9HCE1 1003 aaKnown RBP9.56□□□□□ -0.88
UBR4-208ENST00000459947 NDRG3Q9UGV2 375 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 EDARQ9UNE0 448 aa9.56□□□□□ -0.88
UBR4-208ENST00000459947 HEATR5AQ86XA9 2040 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 SMAD9O15198 467 aaKnown RBP9.55□□□□□ -0.88
UBR4-208ENST00000459947 HIST1H2ABP04908 130 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 NR2C1P13056 603 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 SHC1P29353 583 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 P2RY6Q15077 328 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 OTUD3Q5T2D3 398 aaPredicted RBP9.55□□□□□ -0.88
UBR4-208ENST00000459947 DEF8Q6ZN54 512 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 HIST3H2AQ7L7L0 130 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 LINC00471Q8N535 108 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 RELL2Q8NC24 303 aaPredicted RBP9.55□□□□□ -0.88
UBR4-208ENST00000459947 PIK3C3Q8NEB9 887 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 STEAP2Q8NFT2 490 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 HIST1H2ACQ93077 130 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 MAGIXQ9H6Y5 334 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 RCE1Q9Y256 329 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 GPR52Q9Y2T5 361 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 SH3GLB1Q9Y371 365 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 ENPP4Q9Y6X5 453 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 CCNA2P20248 432 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 KIR2DL2P43627 348 aaPredicted RBP9.55□□□□□ -0.88
UBR4-208ENST00000459947 OR3A2P47893 321 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 SLC25A3Q00325 362 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 CDK20Q8IZL9 346 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 RBM15BQ8NDT2 890 aaKnown RBP9.55□□□□□ -0.88
UBR4-208ENST00000459947 HSH2DQ96JZ2 352 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 YY1AP1Q9H869 796 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 MRPL39Q9NYK5 338 aaKnown RBP9.55□□□□□ -0.88
UBR4-208ENST00000459947 ZNF229Q9UJW7 825 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 MED31Q9Y3C7 131 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 GYG2O15488 501 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 ZNHIT1O43257 154 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 TNFSF13O75888 250 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 AQP8O94778 261 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 OR6A2O95222 327 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 RHCEP18577 417 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 CEACAM7Q14002 265 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 OR7A5Q15622 319 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 LINC00114Q6XXX2 140 aa9.55□□□□□ -0.88
UBR4-208ENST00000459947 MEX3BQ6ZN04 569 aaKnown RBP9.55□□□□□ -0.88
UBR4-208ENST00000459947 ZNF100Q8IYN0 542 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms