RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CENPBD1B2RD01 187 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMEM229AB2RXF0 380 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 NPIPA2E9PIF3 369 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 NPIPA3F8WFD2 350 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 H3BML4 177 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TFECO14948 347 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 NKX2-8O15522 239 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 RGS10O43665 173 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TLX2O43763 284 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMCC2O75069 709 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SERPINI2O75830 405 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SMNDC1O75940 238 aaKnown RBP eCLIP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 VAMP5O95183 116 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 FADS2O95864 444 aaKnown RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 WDPCPO95876 746 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 EPPINO95925 133 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 BCL10O95999 233 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 CRYABP02511 175 aaKnown RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 LYNP07948 512 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 CELA2AP08217 269 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 CCL3P10147 92 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SFTPCP11686 197 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 PEPDP12955 493 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF17P17021 662 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF43P17038 809 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 POU3F2P20265 443 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 GRK5P34947 590 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 OMPP47874 163 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 PCYT1AP49585 367 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 DAP3P51398 398 aaKnown RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 NR1H2P55055 460 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SH3BGRP55822 239 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 CARD18P57730 90 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 GABARAPL2P60520 117 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 CTXN1P60606 82 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 RAC1P63000 192 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TEKQ02763 1124 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 CLN3Q13286 438 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 ITGADQ13349 1161 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 RAPSNQ13702 412 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TUBA3CQ13748 450 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 PON3Q15166 354 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SEC23BQ15437 767 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR7A5Q15622 319 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMEM176BQ3YBM2 270 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 KCTD21Q4G0X4 260 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SYT14P1Q58G82 188 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 EMC4Q5J8M3 183 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 CLEC12AQ5QGZ9 265 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 C6orf141Q5SZD1 244 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 FNDC7Q5VTL7 733 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLX4IPQ5VYV7 408 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 FAM205BPQ63HN1 556 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SPINK14Q6IE38 97 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TUBA3EQ6PEY2 450 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 BORAQ6PGQ7 559 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 H1FNTQ75WM6 255 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 ATG4DQ86TL0 474 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 MARCH9Q86YJ5 346 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TCEANCQ8N8B7 351 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 ANKK1Q8NFD2 765 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR2M7Q8NG81 312 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR2M3Q8NG83 312 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR5J2Q8NH18 312 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 MOSPD2Q8NHP6 518 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 PFN4Q8NHR9 129 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SMPDL3BQ92485 455 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 FCGR1BQ92637 280 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 SAMD8Q96LT4 415 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 RBP7Q96R05 134 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 IL4I1Q96RQ9 567 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 POLDIP3Q9BY77 421 aaKnown RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 FN3KQ9H479 309 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 B3GAT2Q9NPZ5 323 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 INIPQ9NRY2 104 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 VNN3Q9NY84 501 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 FLRT3Q9NZU0 649 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 KLK13Q9UKR3 277 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 NDRG4Q9ULP0 352 aaKnown RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 ERGIC3Q9Y282 383 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TRAPPC4Q9Y296 219 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 B3GALT5Q9Y2C3 310 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 NTNG1Q9Y2I2 539 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 RPH3AQ9Y2J0 694 aaPredicted RBP5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 FAM186AA6NE01 2351 aa5.3□□□□□ -1.56
RNU1-88P-201ENST00000459274 TRAV27A0A087WT01 109 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC22A31A6NKX4 558 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CLCA1A8K7I4 914 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 C11orf98E9PRG8 122 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 G3V3Y1 287 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 LCE2BO14633 110 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 IMPA2O14732 288 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TERTO14746 1132 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 MYL12BO14950 172 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 EFSO43281 561 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PIP5K1CO60331 668 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 NME2P1O60361 137 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 KRT33AO76009 404 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms