RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CASP12Q6UXS9 341 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 SPATA21Q7Z572 469 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 GPAT4Q86UL3 456 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 P3H2Q8IVL5 708 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 RSPO3Q9BXY4 272 aaPredicted RBP16.59■□□□□ 0.25
USP39-209ENST00000458268 NSRP1Q9H0G5 558 aaKnown RBP16.59■□□□□ 0.25
USP39-209ENST00000458268 BCO1Q9HAY6 547 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 GID8Q9NWU2 228 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 ING1Q9UK53 422 aaPredicted RBP16.59■□□□□ 0.25
USP39-209ENST00000458268 USP22Q9UPT9 525 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 PLEKHA6Q9Y2H5 1048 aa16.59■□□□□ 0.25
USP39-209ENST00000458268 A0A1B0GWA3 101 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 A8MVM7 634 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 AIM2O14862 343 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 LYZL6O75951 148 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 AHSA1O95433 338 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 CBLP22681 906 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 HTR2AP28223 471 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 ADSLP30566 484 aaPredicted RBP16.58■□□□□ 0.24
USP39-209ENST00000458268 PCGF2P35227 344 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 RPS5P46782 204 aaKnown RBP16.58■□□□□ 0.24
USP39-209ENST00000458268 IL1RL1Q01638 556 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 STK11Q15831 433 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 CPLX4Q7Z7G2 160 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 ATG4DQ86TL0 474 aaPredicted RBP16.58■□□□□ 0.24
USP39-209ENST00000458268 RANBP3LQ86VV4 465 aaPredicted RBP16.58■□□□□ 0.24
USP39-209ENST00000458268 TMEM99Q8N816 258 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 SH3GL1Q99961 368 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 TMEM27Q9HBJ8 222 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 GP6Q9HCN6 339 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 TRAPPC4Q9Y296 219 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 GMEB1Q9Y692 573 aa16.58■□□□□ 0.24
USP39-209ENST00000458268 LIPT2A6NK58 231 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 ENO4A6NNW6 628 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 ZNF716A6NP11 495 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 ZNF724A8MTY0 619 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 FXYD1O00168 92 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 EIF1BO60739 113 aaKnown RBP16.57■□□□□ 0.24
USP39-209ENST00000458268 CCDC22O60826 627 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 MFN2O95140 757 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 HRGP04196 525 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 COX4I1P13073 169 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 OR3A2P47893 321 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 GNGT1P63211 74 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 VMACQ2NL98 169 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 ALG10BQ5I7T1 473 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 INTS11Q5TA45 600 aaKnown RBP16.57■□□□□ 0.24
USP39-209ENST00000458268 C22orf34Q6ZV56 151 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 KISS1RQ969F8 398 aaPredicted RBP16.57■□□□□ 0.24
USP39-209ENST00000458268 APH1AQ96BI3 265 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 S100PBPQ96BU1 408 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 WFDC6Q9BQY6 131 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 TRIM2Q9C040 744 aa16.57■□□□□ 0.24
USP39-209ENST00000458268 TESQ9UGI8 421 aaKnown RBP16.57■□□□□ 0.24
USP39-209ENST00000458268 CCT8L1PA6NM43 557 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 GPR171O14626 319 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 DNPH1O43598 174 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 MRPL33O75394 65 aaKnown RBP16.56■□□□□ 0.24
USP39-209ENST00000458268 DNAJA1P31689 397 aaKnown RBP16.56■□□□□ 0.24
USP39-209ENST00000458268 PCBP3P57721 371 aaKnown RBP16.56■□□□□ 0.24
USP39-209ENST00000458268 FOXD4Q12950 439 aaPredicted RBP16.56■□□□□ 0.24
USP39-209ENST00000458268 OR1Q1Q15612 314 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 COQ5Q5HYK3 327 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 C9orf135Q5VTT2 229 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 TMEM225Q6GV28 225 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 NET1Q7Z628 596 aaPredicted RBP16.56■□□□□ 0.24
USP39-209ENST00000458268 PATL1Q86TB9 770 aaKnown RBP16.56■□□□□ 0.24
USP39-209ENST00000458268 SLC30A8Q8IWU4 369 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 BHLHE22Q8NFJ8 381 aaPredicted RBP16.56■□□□□ 0.24
USP39-209ENST00000458268 MCHR1Q99705 422 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 POTEKPQ9BYX7 375 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 GPR52Q9Y2T5 361 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 TACC2O95359 2948 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 PDZD2O15018 2839 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 SPG11Q96JI7 2443 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 ABCA4P78363 2273 aa16.56■□□□□ 0.24
USP39-209ENST00000458268 CPSF4LA6NMK7 179 aaKnown RBP16.55■□□□□ 0.24
USP39-209ENST00000458268 TMEM229AB2RXF0 380 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 GCM2O75603 506 aaPredicted RBP16.55■□□□□ 0.24
USP39-209ENST00000458268 CRYGSP22914 178 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 LSP1P33241 339 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 MAP2K6P52564 334 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 DUSP7Q16829 419 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 LRRC23Q53EV4 343 aaPredicted RBP16.55■□□□□ 0.24
USP39-209ENST00000458268 PAQR6Q6TCH4 344 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 BHLHA15Q7RTS1 189 aaPredicted RBP16.55■□□□□ 0.24
USP39-209ENST00000458268 GABRG1Q8N1C3 465 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 C10orf53Q8N6V4 93 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 STEAP2Q8NFT2 490 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 GPR32P1Q8NGA4 272 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 OR8J3Q8NGG0 315 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 SLC35B4Q969S0 331 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 TAMM41Q96BW9 452 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 KTI12Q96EK9 354 aaPredicted RBP16.55■□□□□ 0.24
USP39-209ENST00000458268 UBTD1Q9HAC8 227 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 MYO9AB2RTY4 2548 aa16.55■□□□□ 0.24
USP39-209ENST00000458268 FAM221AA4D161 298 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 SIAH2O43255 324 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 THBDP07204 575 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 PPP3CBP16298 524 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms