RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CYBAP13498 195 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 SRP9P49458 86 aaKnown RBP18.31■□□□□ 0.52
SNX27-204ENST00000458013 FAM69AQ5T7M9 428 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 OGFOD3Q6PK18 319 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 SUMF1Q8NBK3 374 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 TMEM255BQ8WV15 326 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 ELP4Q96EB1 424 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 ULBP2Q9BZM5 246 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 A0A087WUU8 490 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 A0A1W2PS29 197 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 OR7A17O14581 309 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 MLF1P58340 268 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 SLC10A1Q14973 349 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 METAP1DQ6UB28 335 aaPredicted RBP18.31■□□□□ 0.52
SNX27-204ENST00000458013 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.31■□□□□ 0.52
SNX27-204ENST00000458013 H1FXQ92522 213 aaKnown RBP18.31■□□□□ 0.52
SNX27-204ENST00000458013 TM7SF3Q9NS93 570 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 TMEM72A0PK05 275 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 ZC3H12DA2A288 527 aaKnown RBP18.31■□□□□ 0.52
SNX27-204ENST00000458013 RAB40BQ12829 278 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 WBP2NLQ6ICG8 309 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 FAM111BQ6SJ93 734 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 PRICKLE2Q7Z3G6 844 aa18.31■□□□□ 0.52
SNX27-204ENST00000458013 LINC00696Q6ZRV3 163 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 UNKLQ9H9P5 680 aaKnown RBP18.3■□□□□ 0.52
SNX27-204ENST00000458013 CUTCQ9NTM9 273 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 ARPC4-TTLL3A0A0A6YYG9 625 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 CDHR4A6H8M9 788 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 VEGFBP49765 207 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 CYCSP99999 105 aaKnown RBP18.3■□□□□ 0.52
SNX27-204ENST00000458013 EIF4HQ15056 248 aaKnown RBP18.3■□□□□ 0.52
SNX27-204ENST00000458013 SLC5A12Q1EHB4 618 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 OR6F1Q8NGZ6 308 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 MSI2Q96DH6 328 aaKnown RBP18.3■□□□□ 0.52
SNX27-204ENST00000458013 PRRT1Q99946 306 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 ADAMTS4O75173 837 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 IGHV3-9P01782 118 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 IL2RGP31785 369 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 CCR6P51684 374 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 SLC36A2Q495M3 483 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 ZNF767PQ75MW2 155 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 LINC01599Q8WXQ3 324 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 TNFRSF13CQ96RJ3 184 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 NSG1A0A0A6YYJ2 146 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 PENKP01210 267 aaPredicted RBP18.3■□□□□ 0.52
SNX27-204ENST00000458013 IGHG1P01857 330 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 ACP2P11117 423 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 SHC1P29353 583 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 HABP2Q14520 560 aaPredicted RBP18.3■□□□□ 0.52
SNX27-204ENST00000458013 FGF13Q92913 245 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 ARSGQ96EG1 525 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 C20orf24Q9BUV8 137 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 CNTNAP3Q9BZ76 1288 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 SUSD2Q9UGT4 822 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 SLC35A3Q9Y2D2 325 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 RFXAPO00287 272 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 SLC16A14Q7RTX9 510 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 PLEKHM1Q9Y4G2 1056 aa18.3■□□□□ 0.52
SNX27-204ENST00000458013 CLINT1Q14677 625 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 VRK3Q8IV63 474 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 LGALS14Q8TCE9 139 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 ZNF436Q9C0F3 470 aaPredicted RBP18.29■□□□□ 0.52
SNX27-204ENST00000458013 ZNF816-ZNF321PA0A0X1KG74 233 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
SNX27-204ENST00000458013 RPE65Q16518 533 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 ZNF321PQ8N8H1 164 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 C3orf49Q96BT1 292 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 PDCD1LG2Q9BQ51 273 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 KATNB1Q9BVA0 655 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 TREX1Q9NSU2 369 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 MAKP20794 623 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 POLR2IP36954 125 aaKnown RBP18.29■□□□□ 0.52
SNX27-204ENST00000458013 HCCSP53701 268 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 TESK1Q15569 626 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 OR8B8Q15620 311 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 CELF2-AS1Q8N7Q2 184 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 NMNAT3Q96T66 252 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 SIDT1Q9NXL6 827 aaKnown RBP18.29■□□□□ 0.52
SNX27-204ENST00000458013 H0YGG7 62 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 MTCP1P56278 107 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 FAM213BQ8TBF2 198 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 SELENOIQ9C0D9 397 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 SLC6A14Q9UN76 642 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 OR7C1O76099 320 aaPredicted RBP18.29■□□□□ 0.52
SNX27-204ENST00000458013 FGF4P08620 206 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 NPBWR1P48145 328 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 PEA15Q15121 130 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 OR1J4Q8NGS1 313 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 RNF128Q8TEB7 428 aa18.29■□□□□ 0.52
SNX27-204ENST00000458013 TACR3P29371 465 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 MAGEB1P43366 347 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 CDONQ4KMG0 1287 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 METTL4Q8N3J2 472 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 ZNF578Q96N58 590 aaPredicted RBP18.28■□□□□ 0.52
SNX27-204ENST00000458013 SPIN2AQ99865 258 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 SPIN2BQ9BPZ2 258 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 SLC6A20Q9NP91 592 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNX27-204ENST00000458013 ASB4Q9Y574 426 aa18.28■□□□□ 0.52
SNX27-204ENST00000458013 METTL15A6NJ78 407 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms