RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PWWP2BQ6NUJ5 590 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 C11orf88Q6PI97 169 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 C17orf99Q6UX52 265 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM64Q6YI46 380 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 FRRS1Q6ZNA5 592 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 NUDT18Q6ZVK8 323 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ADIPOR2Q86V24 386 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 CBLN2Q8IUK8 224 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 OR56A1Q8NGH5 318 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 TFGQ92734 400 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 S100A16Q96FQ6 103 aaKnown RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF764Q96H86 408 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM138Q9NPI0 162 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 PLEKHM1Q9Y4G2 1056 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 RIIAD1A6NNX1 92 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PRSS44E7EML9 344 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 LEFTY2O00292 366 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SMAD9O15198 467 aaKnown RBP9.49□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF254O75437 659 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 GLAP06280 429 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PRR5P85299 388 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 REEP5Q00765 189 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SLC9A5Q14940 896 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SLC6A19Q695T7 634 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 TSSK4Q6SA08 328 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 DPPA4Q7L190 304 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 NPAS4Q8IUM7 802 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PUSL1Q8N0Z8 303 aaKnown RBP9.49□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM185AQ8NFB2 350 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 OR4C6Q8NH72 309 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 TNFAIP8L1Q8WVP5 186 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM239Q8WW34 195 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 CDS1Q92903 461 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 BPIFA2Q96DR5 249 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PAWRQ96IZ0 340 aaKnown RBP9.49□□□□□ -0.89
CLIP4-208ENST00000456385 TM7SF3Q9NS93 570 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 C2orf42Q9NWW7 574 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 USP36Q9P275 1121 aaKnown RBP9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SIGLEC7Q9Y286 467 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SLC35A3Q9Y2D2 325 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 OR10H1Q9Y4A9 318 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 IGKV1-8A0A0C4DH67 115 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 MEIS3P1A6NDR6 274 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 EMC8O43402 210 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 ERI3O43414 337 aaKnown RBP9.49□□□□□ -0.89
CLIP4-208ENST00000456385 EIF4E2O60573 245 aaKnown RBP9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SNAPC5O75971 98 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 ATG12O94817 140 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 AIFM1O95831 613 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 H2AFB1P0C5Y9 115 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 F3P13726 295 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 RAB13P51153 203 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 EPHB3P54753 998 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 GMFBP60983 142 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 FKBP1BP68106 108 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 STX4Q12846 297 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 GUCA2BQ16661 112 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PCGF3Q3KNV8 242 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 BEX5Q5H9J7 111 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PRAMEF8Q5VWM4 474 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PRAMEF7Q5VXH5 474 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 FAM111BQ6SJ93 734 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 LDLRAD3Q86YD5 345 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PM20D2Q8IYS1 436 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SFXN5Q8TD22 340 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 DOK4Q8TEW6 326 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SNX33Q8WV41 574 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 OTUB2Q96DC9 234 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF75AQ96N20 296 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 EPHX3Q9H6B9 360 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 PELI2Q9HAT8 420 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 KRCC1Q9NPI7 259 aaPredicted RBP9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SLC39A1Q9NY26 324 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 RASL12Q9NYN1 266 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 SLC23A2Q9UGH3 650 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 NDRG3Q9UGV2 375 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 INSL5Q9Y5Q6 135 aa9.49□□□□□ -0.89
CLIP4-208ENST00000456385 TET1Q8NFU7 2136 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TRAV14DV4A0A0A6YYC5 116 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ARPC4-TTLL3A0A0A6YYG9 625 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 A0A1W2PPV9 198 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 A0A1W2PRU2 124 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 DISC1C4P0D8 188 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 H0YC42 278 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ACOT7O00154 380 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 IMPA2O14732 288 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 RASGRP1O95267 797 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 PAPLNO95428 1278 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 HOXB1P14653 301 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-208ENST00000456385 RPA2P15927 270 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF3P17036 446 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 CNR1P21554 472 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 NDUFS1P28331 727 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 GPR1P46091 355 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 MEOX2P50222 304 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 TAS2R20P59543 309 aa9.48□□□□□ -0.89
CLIP4-208ENST00000456385 CSNK1G2P78368 415 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms