RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 LIPT2A6NK58 231 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 SLC22A20A6NK97 555 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 H0YC42 278 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 CCL21O00585 134 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNHIT1O43257 154 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 CXCL13O43927 109 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 MT-ATP6P00846 226 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 OPN1LWP04000 364 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 CRHP06850 196 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 H1F0P07305 194 aaKnown RBP12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 TPD52P55327 224 aaPredicted RBP12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 PER3P56645 1201 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 EGR4Q05215 589 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 FAM69AQ5T7M9 428 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 RIPPLY2Q5TAB7 128 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 RTL6Q6ICC9 239 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 PAPD5Q8NDF8 572 aaKnown RBP12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 TMEM239Q8WW34 195 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 TRIB1Q96RU8 372 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 PRSS27Q9BQR3 290 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 TTYH2Q9BSA4 534 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 TAPBPLQ9BX59 468 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 GLRX2Q9NS18 164 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 CCM2LQ9NUG4 571 aaPredicted RBP12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 SLC5A6Q9Y289 635 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 CORINQ9Y5Q5 1042 aa12.83□□□□□ -0.36
HMGXB4-204ENST00000455359 HEATR5AQ86XA9 2040 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 A0A1W2PNR3 127 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 ZC3H12DA2A288 527 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 hCG_2039718K7EN88 272 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 GLI4P10075 376 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 NQO1P15559 274 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 ENPP1P22413 925 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 YAP1P46937 504 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 HMGA2P52926 109 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 ACTR3P61158 418 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 ESPL1Q14674 2120 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 PON3Q15166 354 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 RNPS1Q15287 305 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNF239Q16600 458 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 PAQR6Q6TCH4 344 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 RPTNQ6XPR3 784 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 CANT1Q8WVQ1 401 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 ACOT11Q8WXI4 607 aaPredicted RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 KTI12Q96EK9 354 aaPredicted RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 DUS3LQ96G46 650 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 RSRC1Q96IZ7 334 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 TACO1Q9BSH4 297 aaKnown RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 NAA11Q9BSU3 229 aaPredicted RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 CHID1Q9BWS9 393 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 MAN2C1Q9NTJ4 1040 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 AURKCQ9UQB9 309 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 MED31Q9Y3C7 131 aa12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 UBR5O95071 2799 aaPredicted RBP12.82□□□□□ -0.36
HMGXB4-204ENST00000455359 MED12Q93074 2177 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 HSPB2A8KAH6 182 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 FTCDNL1E5RQL4 147 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 J3KTA2 159 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 LRRTM2O43300 516 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 VAMP5O95183 116 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 RCBTB2O95199 551 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 IL2RAP01589 272 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 MT-ND1P03886 318 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 IMPDH2P12268 514 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 CEACAM8P31997 349 aaPredicted RBP12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 OR2B6P58173 313 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 H3F3AP84243 136 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 PDK3Q15120 406 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 HSPB2Q16082 182 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 WDR88Q6ZMY6 472 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 P4HA3Q7Z4N8 544 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 NKAIN4Q8IVV8 208 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 LINC00471Q8N535 108 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 SCAIQ8N9R8 606 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 ADPRHL1Q8NDY3 354 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 FNDC9Q8TBE3 224 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 RNF128Q8TEB7 428 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 RND1Q92730 232 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNF845Q96IR2 970 aaPredicted RBP12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 PRRG4Q9BZD6 226 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 RNF122Q9H9V4 155 aa12.81□□□□□ -0.36
HMGXB4-204ENST00000455359 FLNCQ14315 2725 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 IL18BPO95998 194 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 AGAP20933 346 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 FPR1P21462 350 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 GTF2E2P29084 291 aaKnown RBP12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 SMSP52788 366 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 CTBP2P56545 445 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 PMPCAQ10713 525 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 OR7A5Q15622 319 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 SEM1Q6ZVN7 128 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 FCRLAQ7L513 359 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 RRM2BQ7LG56 351 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms