RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DBTP11182 482 aaKnown RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 SDHBP21912 280 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NTSP30990 170 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 THBS2P35442 1172 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 BMXP51813 675 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 EMP2P54851 167 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 POU6F2P78424 691 aaPredicted RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 KRT33BQ14525 404 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NSDHLQ15738 373 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 PHF19Q5T6S3 580 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ACSM5Q6NUN0 579 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 ARMC6Q6NXE6 501 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SLC30A6Q6NXT4 461 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 TNFAIP8L2Q6P589 184 aaPredicted RBP4.46□□□□□ -1.7
RIF1-207ENST00000454583 PLEKHM3Q6ZWE6 761 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 LINGO2Q7L985 606 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 STK32CQ86UX6 486 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NR2C2APQ86WQ0 139 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 OR52P1PQ8NH57 321 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NDNFQ8TB73 568 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 FNDC8Q8TC99 324 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 MPP4Q96JB8 637 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 TSC22D3Q99576 134 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 STRADBQ9C0K7 418 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NELFAQ9H3P2 528 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SOHLH2Q9NX45 425 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 SPRR3Q9UBC9 169 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 PRODH2Q9UF12 536 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 MGAT4BQ9UQ53 548 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 NINQ8N4C6 2090 aa4.46□□□□□ -1.7
RIF1-207ENST00000454583 A0A0G2JK05 382 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 DUXAA6NLW8 204 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 PRR32B1ATL7 298 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 C1QTNF9BB2RNN3 333 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 C1QTNF9P0C862 333 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 LIMS3P0CW19 117 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 LIMS4P0CW20 117 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 C21orf33P30042 268 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 COX10Q12887 443 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 STK11Q15831 433 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 TBR1Q16650 682 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZIK1Q3SY52 487 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 MEDAGQ5VYS4 303 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 TTC33Q6PID6 262 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 PXKQ7Z7A4 578 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZBTB46Q86UZ6 589 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 TMEM123Q8N131 208 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 GTPBP8Q8N3Z3 284 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZNF582Q96NG8 517 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 DCLRE1CQ96SD1 692 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 RACGAP1Q9H0H5 632 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 NRIP3Q9NQ35 241 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 MIEF1Q9NQG6 463 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 SELENONQ9NZV5 590 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 NCDNQ9UBB6 729 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 PISDQ9UG56 409 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 DOLKQ9UPQ8 538 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 YARS2Q9Y2Z4 477 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 NPIPA5A0A0B4J1W7 369 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 TMEM129A0AVI4 362 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 WIPF3A6NGB9 483 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 NPIPA7E9PJI5 369 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 TNFRSF11BO00300 401 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 SEC24DO94855 1032 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 OPN1SWP03999 348 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 EIF2S1P05198 315 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 NPIPA8P0DM63 369 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 LOXP28300 417 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 NOVA1P51513 510 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 P2RX1P51575 399 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 TSPAN31Q12999 210 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 AIMP2Q13155 320 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 OR1Q1Q15612 314 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZNF74Q16587 644 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZNF829Q3KNS6 432 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 B3GNTL1Q67FW5 361 aaPredicted RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 ARSKQ6UWY0 536 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZNF620Q6ZNG0 422 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 SHISA6Q6ZSJ9 500 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 RNF113BQ8IZP6 322 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 FDCSPQ8NFU4 85 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 TMEM255BQ8WV15 326 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 IGFBPL1Q8WX77 278 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 DAZLQ92904 295 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 ALPK1Q96QP1 1244 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 MROQ9BYG7 248 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 HOXD1Q9GZZ0 328 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZNF160Q9HCG1 818 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 UBQLN4Q9NRR5 601 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 MED17Q9NVC6 651 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 CLCF1Q9UBD9 225 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 SLC35A3Q9Y2D2 325 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ZC3H12DA2A288 527 aaKnown RBP4.45□□□□□ -1.7
RIF1-207ENST00000454583 DCDC2BA2VCK2 349 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 FRS3O43559 492 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 GPX5O75715 221 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 LALBAP00709 142 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ALPPP05187 535 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 ALOX5P09917 674 aa4.45□□□□□ -1.7
RIF1-207ENST00000454583 BMP4P12644 408 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms