RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 OR1E2P47887 323 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 OR2B6P58173 313 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 H3F3AP84243 136 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 C1orf140Q5VVS0 124 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 FAM214BQ7L5A3 538 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 VTCN1Q7Z7D3 282 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 ARHGAP24Q8N264 748 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 ADAMTS16Q8TE57 1224 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 ABHD3Q8WU67 409 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 STARD4Q96DR4 205 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 SELENONQ9NZV5 590 aa24.98■■□□□ 1.59
SMARCC1-203ENST00000454240 CYTIPO60759 359 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 PRKD3O94806 890 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 LYPD3O95274 346 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 THY1P04216 161 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 IDUAP35475 653 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 MSX2P35548 267 aaPredicted RBP24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 SLC35A1P78382 337 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 VWA1Q6PCB0 445 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 LINC00114Q6XXX2 140 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 CNEP1R1Q8N9A8 125 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 ZHX1-C8orf76Q96EF9 292 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 PIGMQ9H3S5 423 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 GP6Q9HCN6 339 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 CLEC4AQ9UMR7 237 aa24.97■■□□□ 1.59
SMARCC1-203ENST00000454240 IGKV1D-42A0A075B6H8 117 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 TRAPPC13A5PLN9 417 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 LIPT2A6NK58 231 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 C19orf84I3L1E1 186 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 CHP2O43745 196 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 GMNNO75496 209 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 ZNF682O95780 498 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 PLGP00747 810 aaPredicted RBP24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 FPR1P21462 350 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 FBXL19-AS1Q494R0 122 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 C5orf46Q6UWT4 87 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 BTLAQ7Z6A9 289 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 MCEMP1Q8IX19 187 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 POLR2J2Q9GZM3 115 aaKnown RBP24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 POLR2J3Q9H1A7 115 aaKnown RBP24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 CHST11Q9NPF2 352 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 DCAF13Q9NV06 445 aaKnown RBP24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 MAGEL2Q9UJ55 1249 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 RPS6KA6Q9UK32 745 aa24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 ING1Q9UK53 422 aaPredicted RBP24.96■■□□□ 1.59
SMARCC1-203ENST00000454240 EIF1BO60739 113 aaKnown RBP24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 CGAP01215 116 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 GPIP06744 558 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 ASCL1P50553 236 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 SIRPAP78324 504 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 ABLIM2Q6H8Q1 611 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 RNF217Q8TC41 542 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 KTI12Q96EK9 354 aaPredicted RBP24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 PSD2Q9BQI7 771 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 PTDSS2Q9BVG9 487 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 KLHL9Q9P2J3 617 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 EMC9Q9Y3B6 208 aa24.95■■□□□ 1.58
SMARCC1-203ENST00000454240 ADGRG4Q8IZF6 3080 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 CTBP2P56545 445 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 RASGEF1BQ0VAM2 473 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 OR7A5Q15622 319 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 IFI44LQ53G44 452 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 SP5Q6BEB4 398 aaPredicted RBP24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 DEF8Q6ZN54 512 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 MFSD8Q8NHS3 518 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 GEMIN6Q8WXD5 167 aaKnown RBP24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 HSH2DQ96JZ2 352 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 TMEM43Q9BTV4 400 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 AMBRA1Q9C0C7 1298 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 BCO1Q9HAY6 547 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 NPDC1Q9NQX5 325 aaPredicted RBP24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 KLHL13Q9P2N7 655 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 SLC7A7Q9UM01 511 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 PRPF19Q9UMS4 504 aaKnown RBP24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 SNX13Q9Y5W8 968 aa24.94■■□□□ 1.58
SMARCC1-203ENST00000454240 ZNF814B7Z6K7 855 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 EEF1E1-BLOC1S5C9J1V9 151 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 FTCDNL1E5RQL4 147 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 ARPC2O15144 300 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 EEF1E1O43324 174 aaKnown RBP24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 FZD7O75084 574 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 AHSA1O95433 338 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 COL8A1P27658 744 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 AGTR1P30556 359 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 PDK3Q15120 406 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 PAQR6Q6TCH4 344 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 WDR88Q6ZMY6 472 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 FKBP9P1Q75LS8 142 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 TUSC5Q8IXB3 177 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 OR6K3Q8NGY3 331 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 SLC41A3Q96GZ6 507 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 NAA11Q9BSU3 229 aaPredicted RBP24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 TAPBPLQ9BX59 468 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 PLSCR4Q9NRQ2 329 aa24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 SAMD4AQ9UPU9 718 aaKnown RBP24.93■■□□□ 1.58
SMARCC1-203ENST00000454240 A8MXE2 369 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 MSTNO14793 375 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 OR5F1O95221 314 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 YES1P07947 543 aa24.92■■□□□ 1.58
SMARCC1-203ENST00000454240 CD8BP10966 210 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms