RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SMYD1Q8NB12 490 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 OR52P1PQ8NH57 321 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 PHOSPHO1Q8TCT1 267 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 PROX1Q92786 737 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 CHID1Q9BWS9 393 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 HOXD1Q9GZZ0 328 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 CXXC4Q9H2H0 198 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 IL1RAPQ9NPH3 570 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 PAQR5Q9NXK6 330 aaPredicted RBP16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 ELOVL5Q9NYP7 299 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 MKLN1Q9UL63 735 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 MCTS1Q9ULC4 181 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF443Q9Y2A4 671 aaPredicted RBP16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 EMC9Q9Y3B6 208 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 HRNRQ86YZ3 2850 aaPredicted RBP16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 ITPR3Q14573 2671 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 PRRC2AP48634 2157 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 NPIPB9F8W1W9 429 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 AQP8O94778 261 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 SYNGR4O95473 234 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 HRGP04196 525 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 FESP07332 822 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 CD8BP10966 210 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 CD99P14209 185 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 FASP25445 335 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 SLC34A1Q06495 639 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 GPR68Q15743 365 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 CD226Q15762 336 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 ZSWIM7Q19AV6 140 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 PLPPR5Q32ZL2 321 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 RNF220Q5VTB9 566 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF474Q6S9Z5 364 aaPredicted RBP16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 FAM214BQ7L5A3 538 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 PIWIL3Q7Z3Z3 882 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF614Q8N883 585 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 GPR32P1Q8NGA4 272 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 OR10D3Q8NH80 312 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 ALPK1Q96QP1 1244 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 MED18Q9BUE0 208 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 QRSL1Q9H0R6 528 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 TMEM185BQ9H7F4 350 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF226Q9NYT6 803 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 NKX1-2Q9UD57 310 aaPredicted RBP16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 RIMS3Q9UJD0 308 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 SLC13A4Q9UKG4 626 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 SLC9A8Q9Y2E8 581 aa16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 MAP1AP78559 2803 aaPredicted RBP16.12■□□□□ 0.17
SQSTM1-204ENST00000453046 NPIPA5A0A0B4J1W7 369 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 C7orf72A4D263 438 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 NPIPA7E9PJI5 369 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 GTPBP1O00178 669 aaKnown RBP16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 CXCL13O43927 109 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 TPST1O60507 370 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 DEAF1O75398 565 aaPredicted RBP16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 TIPRLO75663 272 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 BAG2O95816 211 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 FABP3P05413 133 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 NPIPA8P0DM63 369 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 NID1P14543 1247 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 CTBP2P56545 445 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 ATP6AP1Q15904 470 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF141Q15928 474 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 DUSP7Q16829 419 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF311Q5JNZ3 666 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 ESPNLQ6ZVH7 1005 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 ZDHHC21Q8IVQ6 265 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF610Q8N9Z0 462 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 NPAS1Q99742 590 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 EVA1AQ9H8M9 152 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 PLEKHF2Q9H8W4 249 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 KLHL28Q9NXS3 571 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 CLEC4AQ9UMR7 237 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF232Q9UNY5 417 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 TESMINQ9Y4I5 508 aa16.11■□□□□ 0.17
SQSTM1-204ENST00000453046 C16orf97H3BN30 126 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 TNFSF11O14788 317 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 UGT2B17O75795 530 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 LGI1O95970 557 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 CGAP01215 116 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 IFNW1P05000 195 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 ITGA2P17301 1181 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 UGT2B10P36537 528 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 EIF1P41567 113 aaKnown RBP16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 PCYT1AP49585 367 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 RNF144AP50876 292 aaPredicted RBP16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 ATP12AP54707 1039 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF117Q03924 483 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 EXOC3L2Q2M3D2 409 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 HBMQ6B0K9 141 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF836Q6ZNA1 936 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 VRK2Q86Y07 508 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 TGIF2LYQ8IUE0 185 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 CMIPQ8IY22 773 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 LILRA2Q8N149 483 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 OR2V1Q8NHB1 315 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 MBD6Q96DN6 1003 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 GMPPAQ96IJ6 420 aaPredicted RBP16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 WFIKKN1Q96NZ8 548 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 PKP2Q99959 881 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 ARMC7Q9H6L4 198 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms