RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 GABRA1P14867 456 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 ABOP16442 354 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 FASP25445 335 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 DIO1P49895 249 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 RAC3P60763 192 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 CSNK2A1P68400 391 aaPredicted RBP10.4□□□□□ -0.75
SCN9A-204ENST00000452182 EMC4Q5J8M3 183 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 FAM69AQ5T7M9 428 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 MBOAT2Q6ZWT7 520 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 ADGRE4PQ86SQ3 457 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 UBQLNLQ8IYU4 475 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 LINC00471Q8N535 108 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 ATP6V1C2Q8NEY4 427 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 OR4C15Q8NGM1 316 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 OR10D3Q8NH80 312 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 MFSD8Q8NHS3 518 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 ALPK1Q96QP1 1244 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 OR5B2Q96R09 309 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 PTDSS2Q9BVG9 487 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 KLHL4Q9C0H6 718 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 REEP1Q9H902 201 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 S100A14Q9HCY8 104 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 MEPEQ9NQ76 525 aaPredicted RBP10.4□□□□□ -0.75
SCN9A-204ENST00000452182 TIGARQ9NQ88 270 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 PNPLA3Q9NST1 481 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 MED31Q9Y3C7 131 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 FAM208BQ5VWN6 2430 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 SVILO95425 2214 aa10.4□□□□□ -0.75
SCN9A-204ENST00000452182 KIAA1549Q9HCM3 1950 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 TRBV4-1A0A0J9YWV2 114 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 SH3PXD2BA1X283 911 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 FIGNL2A6NMB9 653 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 FTCDNL1E5RQL4 147 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 H0Y3Z8 333 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 H0YC42 278 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 SULT2B1O00204 365 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 TNFRSF11BO00300 401 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 TNFSF11O14788 317 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 SEC14L5O43304 696 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 AHSA1O95433 338 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 OPN1LWP04000 364 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 TPOP07202 933 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 IMPDH2P12268 514 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 IDUAP35475 653 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 UGT2B15P54855 530 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 TPD52P55327 224 aaPredicted RBP10.39□□□□□ -0.75
SCN9A-204ENST00000452182 CTBP2P56545 445 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 CARD18P57730 90 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 SRYQ05066 204 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 PRKCDQ05655 676 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 MFSD13AQ14CX5 517 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 ATP6AP1Q15904 470 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 FGD3Q5JSP0 725 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 C1QL3Q5VWW1 255 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 HBMQ6B0K9 141 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 PODNL1Q6PEZ8 512 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF730Q6ZMV8 503 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 PRICKLE2Q7Z3G6 844 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 LIPHQ8WWY8 451 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 OSTF1Q92882 214 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 STMN2Q93045 179 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 CPNE4Q96A23 557 aaPredicted RBP10.39□□□□□ -0.75
SCN9A-204ENST00000452182 KTI12Q96EK9 354 aaPredicted RBP10.39□□□□□ -0.75
SCN9A-204ENST00000452182 BDH2Q9BUT1 245 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 TAPBPLQ9BX59 468 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 NTN4Q9HB63 628 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 TMCC3Q9ULS5 477 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 CAMK2AQ9UQM7 478 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 SAMHD1Q9Y3Z3 626 aaKnown RBP10.39□□□□□ -0.75
SCN9A-204ENST00000452182 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
SCN9A-204ENST00000452182 A0A1W2PNR3 127 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 LIPT2A6NK58 231 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 GNGT2O14610 69 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 ZNHIT1O43257 154 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 EIF1BO60739 113 aaKnown RBP10.38□□□□□ -0.75
SCN9A-204ENST00000452182 MT-ATP6P00846 226 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 LDLRP01130 860 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 DNAJA1P31689 397 aaKnown RBP10.38□□□□□ -0.75
SCN9A-204ENST00000452182 RPS5P46782 204 aaKnown RBP10.38□□□□□ -0.75
SCN9A-204ENST00000452182 EIF1AXP47813 144 aaKnown RBP10.38□□□□□ -0.75
SCN9A-204ENST00000452182 AGFG1P52594 562 aaKnown RBP10.38□□□□□ -0.75
SCN9A-204ENST00000452182 SLC35A1P78382 337 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 ELF3P78545 371 aaPredicted RBP10.38□□□□□ -0.75
SCN9A-204ENST00000452182 H3F3AP84243 136 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 C19orf57Q0VDD7 668 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 SEC23BQ15437 767 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 C3AR1Q16581 482 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF74Q16587 644 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 CHMP1BQ7LBR1 199 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 RRM2BQ7LG56 351 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 CD163Q86VB7 1156 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 DOLPP1Q86YN1 238 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 NRMQ8IXM6 262 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 OR4K5Q8NGD3 323 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 OR5M9Q8NGP3 310 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 OR52J3Q8NH60 311 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 TAAR8Q969N4 342 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 NRBF2Q96F24 287 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 TUBA1CQ9BQE3 449 aa10.38□□□□□ -0.75
SCN9A-204ENST00000452182 TP63Q9H3D4 680 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms