RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ACVR1BP36896 505 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 NSG1P42857 185 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 ZNF763Q0D2J5 394 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 SQSTM1Q13501 440 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 KCNAB1Q14722 419 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 BEX5Q5H9J7 111 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 GLT8D1Q68CQ7 371 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 CYB5R2Q6BCY4 276 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 TNFAIP8L2Q6P589 184 aaPredicted RBP7.96□□□□□ -1.13
LSM5-208ENST00000450169 PARGQ86W56 976 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 APCDD1Q8J025 514 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 OR13C5Q8NGS8 318 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 OR4Q3Q8NH05 313 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 SKA2Q8WVK7 121 aaPredicted RBP7.96□□□□□ -1.13
LSM5-208ENST00000450169 HS6ST2Q96MM7 605 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 C2orf88Q9BSF0 95 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 SOX7Q9BT81 388 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 NDC1Q9BTX1 674 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 TEX12Q9BXU0 123 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 A4GALTQ9NPC4 353 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 MEPEQ9NQ76 525 aaPredicted RBP7.96□□□□□ -1.13
LSM5-208ENST00000450169 PISDQ9UG56 409 aa7.96□□□□□ -1.13
LSM5-208ENST00000450169 TMEM72A0PK05 275 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 CXorf65A6NEN9 183 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ANTXRLA6NF34 631 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 GGT3PA6NGU5 568 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 F5H0A9 414 aaPredicted RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 BLOC1S5-TXNDC5H3BN57 136 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 CLDN4O14493 209 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 PTGESO14684 152 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 UGDHO60701 494 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 CR2P20023 1033 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 HOXD9P28356 352 aaPredicted RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 DDTP30046 118 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 DLSTP36957 453 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ADH7P40394 386 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 P2RX1P51575 399 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 MRPS10P82664 201 aaKnown RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 MC1RQ01726 317 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 TUSC3Q13454 348 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 TEAD2Q15562 447 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ZNF239Q16600 458 aaKnown RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 C4orf46Q504U0 113 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ARSJQ5FYB0 599 aaPredicted RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 UBXN11Q5T124 520 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 CDPF1Q6NVV7 123 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 PLBD1Q6P4A8 553 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 FAM199XQ6PEV8 388 aaPredicted RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 IL34Q6ZMJ4 242 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 GAREM2Q75VX8 874 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 DPPA4Q7L190 304 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ABHD13Q7L211 337 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ADCK2Q7Z695 626 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 LRRTM1Q86UE6 522 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 TMEM99Q8N816 258 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 GPRC5AQ8NFJ5 357 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 EID2BQ96D98 161 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 SLC25A38Q96DW6 304 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 LRIG1Q96JA1 1093 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 PGLYRP3Q96LB9 341 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ZFP42Q96MM3 310 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 MOGAT1Q96PD6 335 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 DERL3Q96Q80 235 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 KLF16Q9BXK1 252 aaPredicted RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 SLC12A9Q9BXP2 914 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 LAT2Q9GZY6 243 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ATG10Q9H0Y0 220 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ASB8Q9H765 288 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 SEC61A2Q9H9S3 476 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 BRF2Q9HAW0 419 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 MRPS30Q9NP92 439 aaKnown RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 MED17Q9NVC6 651 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 CNIH4Q9P003 139 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 RNF181Q9P0P0 153 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 ZNF230Q9UIE0 474 aaPredicted RBP7.96□□□□□ -1.14
LSM5-208ENST00000450169 PIAS3Q9Y6X2 628 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 SCN8AQ9UQD0 1980 aa7.96□□□□□ -1.14
LSM5-208ENST00000450169 GREB1Q4ZG55 1949 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 RNF222A6NCQ9 220 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 OR5H14A6NHG9 310 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 A6NLC8 198 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 DRGXA6NNA5 263 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 METTL12A8MUP2 240 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TMEM189-UBE2V1I3L0A0 370 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 ACOT7O00154 380 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 EMC8O43402 210 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 CLDN11O75508 207 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 CD8AP01732 235 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 FURINP09958 794 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 SFTA3P0C7M3 94 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 C1GALT1C1LP0DN25 315 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 CD79AP11912 226 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 PTHLHP12272 177 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 NME1P15531 152 aaKnown RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 GNSP15586 552 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 GABRR2P28476 465 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 FAUP35544 74 aaKnown RBP7.95□□□□□ -1.14
LSM5-208ENST00000450169 PTH2RP49190 550 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 TAS2R43P59537 309 aa7.95□□□□□ -1.14
LSM5-208ENST00000450169 CBFBQ13951 182 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms