RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 C2orf42Q9NWW7 574 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 COPZ2Q9P299 210 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 MEIS3P1A6NDR6 274 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 FMO6PO60774 539 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 KHDRBS3O75525 346 aaKnown RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 STX11O75558 287 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 CCL5P13501 91 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ADH7P40394 386 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 EMDP50402 254 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 CCR9P51686 369 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 OPCMLQ14982 345 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 KIAA1324Q6UXG2 1013 aaKnown RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 GFI1Q99684 422 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ANKRD10Q9NXR5 420 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 MCIDASD6RGH6 385 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 SMAD9O15198 467 aaKnown RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 CDC123O75794 336 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ACSM4P0C7M7 580 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 NID1P14543 1247 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
ERCC3-203ENST00000445889 KIAA1024LP59773 190 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 SIRPAP78324 504 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 MELKQ14680 651 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 GARNL3Q5VVW2 1013 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ALKAL2Q6UX46 152 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 DGAT2L6Q6ZPD8 337 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 OR2L13Q8N349 312 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 MFSD9Q8NBP5 474 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 ZBTB44Q8NCP5 570 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 MOSPD2Q8NHP6 518 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 COQ8AQ8NI60 647 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 PMEPA1Q969W9 287 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 NPFFR2Q9Y5X5 522 aa13.09□□□□□ -0.31
ERCC3-203ENST00000445889 A0A1B0GWA3 101 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 CHURC1-FNTBB4DL54 471 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 CXCL2P19875 107 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 SLC2A5P22732 501 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 SGCGQ13326 291 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 CST6Q15828 149 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 HSD17B12Q53GQ0 312 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 TMEM31Q5JXX7 168 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 PRSS42Q7Z5A4 293 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 FGD2Q7Z6J4 655 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 HAVCR2Q8TDQ0 301 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 ZNF707Q96C28 371 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-203ENST00000445889 CXorf58Q96LI9 332 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 PITHD1Q9GZP4 211 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-203ENST00000445889 MCCC2Q9HCC0 563 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 CAMK2AQ9UQM7 478 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 POM121BA6NF01 834 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 PRR32B1ATL7 298 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 GMFGO60234 142 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 SRMP19623 302 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 FAM53BQ14153 422 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 FRMD1Q8N878 549 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 ZNF511Q8NB15 262 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 SMIM4Q8WVI0 70 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 TSACCQ96A04 125 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-203ENST00000445889 RASD2Q96D21 266 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 ZNF350Q9GZX5 532 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 LIN7BQ9HAP6 207 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 PHPT1Q9NRX4 125 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-203ENST00000445889 PCDHGA5Q9Y5G8 931 aa13.08□□□□□ -0.32
ERCC3-203ENST00000445889 TBC1D3EA0A087X179 549 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 A0A1W2PQU0 124 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 PTP4A3O75365 173 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 TSPAN9O75954 239 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 MYOGP15173 224 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 PSMB1P20618 241 aaKnown RBP13.07□□□□□ -0.32
ERCC3-203ENST00000445889 TAS2R43P59537 309 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 NANOS3P60323 173 aaKnown RBP13.07□□□□□ -0.32
ERCC3-203ENST00000445889 TNFRSF17Q02223 184 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 CDK5R1Q15078 307 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 TUSC1Q2TAM9 212 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 ALG10BQ5I7T1 473 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 ZNF761Q86XN6 746 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-203ENST00000445889 MEIOBQ8N635 442 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 PATE1Q8WXA2 126 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 OR1F2PQ96R84 312 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 CTSBP07858 339 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 GBX2P52951 348 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-203ENST00000445889 C2orf27AQ580R0 203 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 ZNF425Q6IV72 752 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 C1orf216Q8TAB5 229 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 SPPL3Q8TCT6 385 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 SMIM19Q96E16 107 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 TMEM27Q9HBJ8 222 aa13.07□□□□□ -0.32
ERCC3-203ENST00000445889 NOX3Q9HBY0 568 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms