RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CCDC65Q8IXS2 484 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 PNKDQ8N490 385 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 OR4K14Q8NGD5 310 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 FGF11Q92914 225 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 EFHD2Q96C19 240 aaPredicted RBP3.2□□□□□ -1.9
PFDN4-202ENST00000441080 ZNF285Q96NJ3 590 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 KCNA7Q96RP8 456 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 NAT9Q9BTE0 207 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 LRRN3Q9H3W5 708 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 RBKSQ9H477 322 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 ZNF225Q9UK10 706 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 BLOC1S6Q9UL45 172 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 PRPF19Q9UMS4 504 aaKnown RBP3.2□□□□□ -1.9
PFDN4-202ENST00000441080 TRAF3IP3Q9Y228 551 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 TIMM10BQ9Y5J6 103 aa3.2□□□□□ -1.9
PFDN4-202ENST00000441080 DDX49Q9Y6V7 483 aaKnown RBP3.2□□□□□ -1.9
PFDN4-202ENST00000441080 ARPC3O15145 178 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 MAGEB3O15480 346 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 POLR2DO15514 142 aaKnown RBP3.19□□□□□ -1.9
PFDN4-202ENST00000441080 MBTPS2O43462 519 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 CA11O75493 328 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 PSG2P11465 335 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 CCDC130P13994 396 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 CXCR2P25025 360 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 HMGB2P26583 209 aaKnown RBP3.19□□□□□ -1.9
PFDN4-202ENST00000441080 HLCSP50747 726 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 UCNP55089 124 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 UNC119Q13432 240 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 ATAD3BQ5T9A4 648 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 TMIGD1Q6UXZ0 262 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 C6orf223Q8N319 242 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 FAM71E2Q8N5Q1 922 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 ZNF433Q8N7K0 673 aaPredicted RBP3.19□□□□□ -1.9
PFDN4-202ENST00000441080 GMCL1P1Q8NEA9 526 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 OR10G3Q8NGC4 313 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 OR2T3Q8NH03 318 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 RSPH1Q8WYR4 309 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 PAGE5Q96GU1 130 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 P2RY13Q9BPV8 354 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 RASL11BQ9BPW5 248 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 RAB34Q9BZG1 259 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 SMPD3Q9NY59 655 aaPredicted RBP3.19□□□□□ -1.9
PFDN4-202ENST00000441080 PRO0461Q9UI25 63 aa3.19□□□□□ -1.9
PFDN4-202ENST00000441080 PLEKHH1Q9ULM0 1364 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 E9PBE3 544 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 SCGNO76038 276 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 RHOBTB1O94844 696 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 DIRAS1O95057 198 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 NPR2P20594 1047 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 RPL13AP40429 203 aaKnown RBP3.18□□□□□ -1.9
PFDN4-202ENST00000441080 KIR2DS4P43632 304 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 EFNB2P52799 333 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 ZNF763Q0D2J5 394 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 ASPHQ12797 758 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 TAF7Q15545 349 aaPredicted RBP3.18□□□□□ -1.9
PFDN4-202ENST00000441080 SLC15A2Q16348 729 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 NRF1Q16656 503 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 PARP15Q460N3 678 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 BCL7AQ4VC05 210 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 CFAP157Q5JU67 520 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 OR52E8Q6IFG1 317 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 TIFABQ6ZNK6 161 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 RFLNAQ6ZTI6 216 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 PRSS41Q7RTY9 318 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 ENTHD1Q8IYW4 607 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 FANK1Q8TC84 345 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 BLOC1S5Q8TDH9 187 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 PIGCQ92535 297 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 EMG1Q92979 244 aaKnown RBP3.18□□□□□ -1.9
PFDN4-202ENST00000441080 NRIP2Q9BQI9 281 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 C20orf85Q9H1P6 137 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 REEP4Q9H6H4 257 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 POLDIP2Q9Y2S7 368 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 RPL36Q9Y3U8 105 aaKnown RBP3.18□□□□□ -1.9
PFDN4-202ENST00000441080 CACNG2Q9Y698 323 aa3.18□□□□□ -1.9
PFDN4-202ENST00000441080 H0YCG3 227 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 FAM189A1O60320 539 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 ATP5LO75964 103 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 OPN1MWP04001 364 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 KLK3P07288 261 aaPredicted RBP3.17□□□□□ -1.9
PFDN4-202ENST00000441080 HOXC4P09017 264 aaPredicted RBP3.17□□□□□ -1.9
PFDN4-202ENST00000441080 OPN1MW2P0DN77 364 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 OPN1MW3P0DN78 364 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 PRG2P13727 222 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 ZNF44P15621 663 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 CCNCP24863 283 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 RDXP35241 583 aaKnown RBP3.17□□□□□ -1.9
PFDN4-202ENST00000441080 VDAC2P45880 294 aaPredicted RBP3.17□□□□□ -1.9
PFDN4-202ENST00000441080 IFNAR2P48551 515 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 CASP4P49662 377 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 SH3BGRP55822 239 aaPredicted RBP3.17□□□□□ -1.9
PFDN4-202ENST00000441080 MECOMQ03112 1051 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 DPYSL2Q16555 572 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 CCDC152Q4G0S7 254 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 OR2G6Q5TZ20 316 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 CYB5R2Q6BCY4 276 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 HSDL2Q6YN16 418 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 Q6ZN92 141 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 PGAP1Q75T13 922 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 NLRP9Q7RTR0 991 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms