RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 TSPAN10Q9H1Z9 355 aaPredicted RBP13.68□□□□□ -0.22
PCNX1-202ENST00000439984 MTHFD2LQ9H903 347 aaPredicted RBP13.68□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF230Q9UIE0 474 aaPredicted RBP13.68□□□□□ -0.22
PCNX1-202ENST00000439984 GLI3P10071 1580 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 DDX60LQ5H9U9 1706 aaKnown RBP13.68□□□□□ -0.22
PCNX1-202ENST00000439984 ANKRD61A6NGH8 418 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 OR10A3P58181 314 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 IRF4Q15306 451 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 TMEM207Q6UWW9 146 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 RHOUQ7L0Q8 258 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 RDH10Q8IZV5 341 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF561Q8N587 486 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 OR9A2Q8NGT5 310 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 BPIFA2Q96DR5 249 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 LAMB1P07942 1786 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 SERPINA5P05154 406 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 SLC14A1Q13336 389 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF587Q96SQ5 575 aaPredicted RBP13.68□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF442Q9H7R0 627 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 MROH6A6NGR9 719 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 M0R082 166 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 IMPA2O14732 288 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 ELNP15502 786 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 MRPS34P82930 218 aaKnown RBP13.68□□□□□ -0.22
PCNX1-202ENST00000439984 SH3RF2Q8TEC5 729 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 RAB39BQ96DA2 213 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 PAAF1Q9BRP4 392 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 PRR14Q9BWN1 585 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF281Q9Y2X9 895 aa13.68□□□□□ -0.22
PCNX1-202ENST00000439984 SURF4O15260 269 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 HMGN2P05204 90 aaKnown RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 HSD11B2P80365 405 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 FABP5Q01469 135 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF322Q6U7Q0 402 aaPredicted RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 FAM185AQ8N0U4 392 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 HSD17B11Q8NBQ5 300 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 OR6N1Q8NGY5 312 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 BRF2Q9HAW0 419 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 KPTNQ9Y664 436 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 SYT7O43581 403 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 DNAJB6O75190 326 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 SIM1P81133 766 aaPredicted RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 OR7A5Q15622 319 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 METTL27Q8N6F8 245 aaPredicted RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 GIMAP5Q96F15 307 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 IKZF5Q9H5V7 419 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 DMRT3Q9NQL9 472 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 FBXO7Q9Y3I1 522 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 YKT6O15498 198 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 SEC13P55735 322 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 KHSRPQ92945 711 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■□□□ 14.5
PCNX1-202ENST00000439984 PTDSS2Q9BVG9 487 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 CPEP16870 476 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 BMPR1AP36894 532 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 FKBP1BP68106 108 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 SYT3Q9BQG1 590 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 TAF9BQ9HBM6 251 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 PLEKHM1Q9Y4G2 1056 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 IGKV6D-21A0A0A0MT36 114 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 TCRBV16S1A1N1A0A5B0 115 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 TMEM150CB9EJG8 249 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 PNPP00491 289 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 OR8G3PP0DMU2 310 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 POU3F3P20264 500 aaPredicted RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 PTBP1P26599 531 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■□□ 17.3
PCNX1-202ENST00000439984 ZNF619Q8N2I2 560 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 LMNTD1Q8N9Z9 388 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 SDSLQ96GA7 329 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 CMSS1Q9BQ75 279 aaKnown RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 IL26Q9NPH9 171 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 UMAD1C9J7I0 102 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 TGOLN2O43493 480 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 PTAFRP25105 342 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 ADRA1AP35348 466 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF140P52738 457 aaPredicted RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 HNF4GQ14541 408 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 PLPP4Q5VZY2 271 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 OLIG3Q7RTU3 272 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 SYT9Q86SS6 491 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 OR13C2Q8NGS9 318 aa13.67□□□□□ -0.22
PCNX1-202ENST00000439984 GCDHQ92947 438 aaPredicted RBP13.67□□□□□ -0.22
PCNX1-202ENST00000439984 DOK2O60496 412 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 IQCF3P0C7M6 154 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 DRD2P14416 443 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 COTL1Q14019 142 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 SGCAQ16586 387 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 SULF2Q8IWU5 870 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 TXN2Q99757 166 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 NIPSNAP3BQ9BS92 247 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 CDCA4Q9BXL8 241 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 POMT2Q9UKY4 750 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 ZNF623O75123 536 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 DIRAS3O95661 229 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 EPHA4P54764 986 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 PGAM5Q96HS1 289 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 CXorf58Q96LI9 332 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 NMNAT2Q9BZQ4 307 aa13.66□□□□□ -0.22
PCNX1-202ENST00000439984 SMG9Q9H0W8 520 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms