RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 RLIMQ9NVW2 624 aa16.6■□□□□ 0.25
CCDC78-204ENST00000439619 MALT1Q9UDY8 824 aa16.6■□□□□ 0.25
CCDC78-204ENST00000439619 DSPPQ9NZW4 1301 aa16.6■□□□□ 0.25
CCDC78-204ENST00000439619 NUP214P35658 2090 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 DPRXA6NFQ7 191 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 TRIM64A6NGJ6 449 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 TRIM64BA6NI03 449 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 CLIC1O00299 241 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 GKN3PP0CG01 181 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 PTAFRP25105 342 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 MVDP53602 400 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 IRX1P78414 480 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 OTUD3Q5T2D3 398 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 PRAMEF8Q5VWM4 474 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 PRAMEF7Q5VXH5 474 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 TMEM225Q6GV28 225 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 ABHD12BQ7Z5M8 362 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 KBTBD8Q8NFY9 601 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 OR9I1Q8NGQ6 314 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 AURKBQ96GD4 344 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 TMEM19Q96HH6 336 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 SF3B5Q9BWJ5 86 aaKnown RBP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 CISD1Q9NZ45 108 aaKnown RBP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 POU2F3Q9UKI9 436 aa16.59■□□□□ 0.25
CCDC78-204ENST00000439619 NIPBLQ6KC79 2804 aaeCLIP16.59■□□□□ 0.25
CCDC78-204ENST00000439619 A8MVM7 634 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 ABCD4O14678 606 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 IMPDH2P12268 514 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 PPIBP23284 216 aaKnown RBP16.58■□□□□ 0.24
CCDC78-204ENST00000439619 EDNRAP25101 427 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 CDH11P55287 796 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 CEACAM7Q14002 265 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 RGNQ15493 299 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 OR7A5Q15622 319 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 ZNF311Q5JNZ3 666 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 C1QTNF12Q5T7M4 302 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-204ENST00000439619 OR52N5Q8NH56 324 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 LILRB1Q8NHL6 650 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-204ENST00000439619 BBS10Q8TAM1 723 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 GTF2H4Q92759 462 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 TRIM2Q9C040 744 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 PIF1Q9H611 641 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 A4GALTQ9NPC4 353 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 PCDHB14Q9Y5E9 798 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 MAGED1Q9Y5V3 778 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-204ENST00000439619 FLVCR1Q9Y5Y0 555 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 ACANP16112 2415 aa16.58■□□□□ 0.24
CCDC78-204ENST00000439619 KRT33AO76009 404 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 VAMP5O95183 116 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 LY6G6DO95868 133 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 DANCRP0C864 163 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 ACAA2P42765 397 aaKnown RBP16.57■□□□□ 0.24
CCDC78-204ENST00000439619 MRPL19P49406 292 aaKnown RBP16.57■□□□□ 0.24
CCDC78-204ENST00000439619 SLC17A1Q14916 467 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 MAPK11Q15759 364 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 GTDC1Q4AE62 458 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 RPS26P11Q5JNZ5 115 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-204ENST00000439619 AGAP6Q5VW22 663 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 SLC2A7Q6PXP3 512 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 SLC22A25Q6T423 547 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 KLHL24Q6TFL4 600 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 GPAT4Q86UL3 456 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 KRT73Q86Y46 540 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 CIARTQ8N365 385 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-204ENST00000439619 C17orf78Q8N4C9 275 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 C1orf162Q8NEQ5 155 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-204ENST00000439619 SLC35B4Q969S0 331 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 TMEM45BQ96B21 275 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 ATP6V1G3Q96LB4 118 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 MUS81Q96NY9 551 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 CCDC28BQ9BUN5 200 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 PAIP1Q9H074 479 aaKnown RBP16.57■□□□□ 0.24
CCDC78-204ENST00000439619 BARX1Q9HBU1 254 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-204ENST00000439619 BCL2L10Q9HD36 194 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 TMEM45AQ9NWC5 275 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 RPS6KB2Q9UBS0 482 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 DCTN4Q9UJW0 460 aa16.57■□□□□ 0.24
CCDC78-204ENST00000439619 ZC3H12DA2A288 527 aaKnown RBP16.56■□□□□ 0.24
CCDC78-204ENST00000439619 LIPT2A6NK58 231 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 OVOL3O00110 214 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 RAMP1O60894 148 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 AHSA1O95433 338 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 SOD3P08294 240 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 GTF2E2P29084 291 aaKnown RBP16.56■□□□□ 0.24
CCDC78-204ENST00000439619 IDH3AP50213 366 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 ZNF83P51522 516 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 PPP2R2BQ00005 443 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 VEZF1Q14119 521 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 GABRA6Q16445 453 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 CLEC12BQ2HXU8 276 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 SEZ6L2Q6UXD5 910 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 AAED1Q7RTV5 226 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 CLIP4Q8N3C7 705 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 POMGNT2Q8NAT1 580 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 OR9K2Q8NGE7 335 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 NEUROG1Q92886 237 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 HS6ST2Q96MM7 605 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 SPATA5L1Q9BVQ7 753 aa16.56■□□□□ 0.24
CCDC78-204ENST00000439619 ADPRHL2Q9NX46 363 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms